Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq102 140 3e-28
seq7704 114 1e-20
>seq102
Length=36553
Score = 140 bits (154), Expect = 3e-28
Identities = 207/291 (71%), Gaps = 2/291 (1%)
Strand=Plus/Plus
Query 50988 AAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTC 51047
||| || ||||| ||||| |||||||| || | || ||||||| || | ||| ||
Sbjct 12775 AAATTTGCGCTTGCAGCCTTGATAGTTCATGTATCGTATCTTGCCAAAGATGTCGCGCTC 12834
Query 51048 TTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTAG 51106
|| | | |||| || || || || | || ||||||||| || || || || || |
Sbjct 12835 CTTCCA-GCCCTGATCATGAACGCCACCAACTGACCACATGCAGCCGACGTACCCATTGG 12893
Query 51107 GATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGT 51166
|||| || ||||||| |||||| | ||| || || | |||| || |||| ||| |
Sbjct 12894 GATCCCGTCCATCCAGGCTGTACTTATCATTGAGTAGTATGCAGTACTCCAACGCCTGCT 12953
Query 51167 CTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCA 51226
| | | | ||||| || | ||||||||| |||||||||||||||| | | |||||||
Sbjct 12954 CGGGAGTCTCAGTCCACTCGAGAATTTTCTTCGCCCAGTACATGCGCAGGAATCCGTGCA 13013
Query 51227 TCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGT 51277
|||||||||| | || ||| || || |||||||||| |||||||
Sbjct 13014 TCTTGCCCTCCCTGACCAGTTGCAACTGTGCAGAGTTCCACAGGTCGTCGT 13064
>seq7704
Length=29863
Score = 114 bits (126), Expect = 1e-20
Identities = 158/219 (72%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || || || | || ||||| ||||||| | || || || ||
Sbjct 18347 ACGATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCG 18406
Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
|| || || ||||| |||| |||| || | ||| ||||||||||| ||||| ||
Sbjct 18407 TCGGATACCATCGAAAATGTCA---AAGCCAAGATTCAG-GACAAAGAAGGAATTCCTCC 18462
Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171
|| || ||||| | || ||||| ||||| ||||| ||||||| |||||| | |||
Sbjct 18463 AGATCAGCAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGA 18522
Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| ||||| ||||| || || | || || |||||
Sbjct 18523 TTACAACATTCAGAAAGAGTCAACATTGCACTTGGTGCT 18561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433074149280605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |