Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq42801 215 6e-51 >seq42801 Length=1186 Score = 215 bits (238), Expect = 6e-51 Identities = 532/794 (67%), Gaps = 25/794 (3%) Strand=Plus/Minus Query 51245 GTCGCCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCA 51304 || |||||||| ||| |||| ||| || | ||||||||||| |||||||| ||||| Sbjct 793 GTTGCCCAGGCTGGCGTTCATGCTGTTGAGAATATCGCCGTTGTCCGCGTCGATCTCCCA 734 Query 51305 CGCAAACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCG 51364 | || | || ||| | || | | |||||||| ||| ||||| | | || || Sbjct 733 GGAGAATAGGCCGCCCAGCTGCTTATCCAACACGTACTTGCCTTTGGCCTGCCCCGAGCG 674 Query 51365 AGCGTTGTCGAACGTGATCAGGTTGCCCGCGATCGGTTCGAAGCCGTACGCAGCCTCGGC 51424 || | ||| || |||||||| | ||| | | | |||| ||| |||| | || || || Sbjct 673 GGCATCGTCAAAGGTGATCAGATCGCCGGTGGTAGGTTTGAACACGTAAGGCGCTTCCGC 614 Query 51425 GATCAGATCGTAGTAGAACTCGTAGTCTTTG---ACGAACTCGTTCGCGATCTGCCGATA 51481 | |||||| | ||| | || | | ||||| | | |||||||| || || Sbjct 613 CGTGGCGTCGTAGGTGTACTGCCACTCGCCGCTCATGAACTGGCTGGCGATCTGGCGGTA 554 Query 51482 GTCGACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCA 51541 ||| || | || || ||||||||||||| || || ||| |||| |||| ||||| Sbjct 553 GTCCACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTGCCGGTGAACGG 494 Query 51542 GTTCGGTTCGTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCC 51601 | ||| || | ||||||| |||| | ||| ||||| | ||||| || ||| Sbjct 493 AAT--GTT-GTTCTGGTAGCCGTTCACCCCGGTCCAACCGCGGCCATACATGGCGGTGCC 437 Query 51602 GACGACGATCTT---CTGATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTC 51658 |||||||||||| | | ||| |||||||| | || |||| |||| | | | Sbjct 436 GACGACGATCTTGCCCGGCTTG---ACGCCCTGCGCCAGCAGCGCATTCACGCCGTTCAC 380 Query 51659 GGTGGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAG 51718 |||||||| ||| || |||| ||||| ||| | |||||| | ||||| Sbjct 379 CGTGGTGTAGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGATGCCCCAG 320 Query 51719 ATCGGT--GTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAAC 51776 | | | | || | || || | ||| |||||| |||| ||||| |||| | ||| | Sbjct 319 GTTTTTCAGATCGA--AGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATC 262 Query 51777 TGCGTCTGCGCCCGAGCGTAGTCGACGAC-TTGA--ATTTTATCGTAGCCCGCGCTGATG 51833 ||||||| || ||| || | || ||| || || || | ||| ||||||||| Sbjct 261 GAGATCTGCGC--GA-CGTTGTATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATG 205 Query 51834 GCGCTGGTCAACAGGTACGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGC 51893 ||| ||||| | ||| ||| || | || || || || ||||| | ||| Sbjct 204 GCGGAGGTCAGCTCATACTTGCGGCCGGTTTCCGCCGACAGCTGATCCAGCATCGCCCGC 145 Query 51894 AGCTCGGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGA 51953 || || ||| ||| ||| || || | || || || ||| | |||||| | || Sbjct 144 AGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTCCTGA--GGGCT-GCCCAGATTCGGG 88 Query 51954 TTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAA 52013 |||||||||||||||||||| || |||||||||| || || ||||||||||||||||| Sbjct 87 TTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAG 28 Query 52014 GTCAGCAGAAACTC 52027 ||| |||| ||||| Sbjct 27 GTCTGCAGGAACTC 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537280187837320