Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 232 7e-56
>seq19922
Length=1369
Score = 232 bits (256), Expect = 7e-56
Identities = 378/543 (70%), Gaps = 1/543 (0%)
Strand=Plus/Minus
Query 93088 TAAGCAC-GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATG 93146
||||||| ||||| ||| ||| | || ||||| || || |||| |||||| ||| |
Sbjct 1222 TAAGCACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGG 1163
Query 93147 TTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaa 93206
| | ||| || | || || || ||||| ||||| || || || |||||||| || |
Sbjct 1162 TAAGACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGA 1103
Query 93207 aaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTAC 93266
| || || ||||| || || ||||| || | || || ||| |||| ||||| | ||
Sbjct 1102 AGAAGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCG 1043
Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326
| |||||| | ||||||||| || || ||| | | || | ||||| || |
Sbjct 1042 AGGAGATCCAAGACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGG 983
Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
| || || ||||| || |||| | || ||| || ||||| || ||||| | || |
Sbjct 982 CATTGAAGAGGTAGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGT 923
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
||||||| || |||||||||||||| ||||| ||||| || || || || | || || |
Sbjct 922 ACATTTCCGAGTGGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTG 863
Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506
|||| |||||||| || || | ||| || ||||| ||||| || || || || || |
Sbjct 862 TGATTTGCACTTCCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGG 803
Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCC 93566
| ||||| |||||||| | ||| || || || ||||| ||| | || | |||
Sbjct 802 CGGCAAAGAAAGCCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCC 743
Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626
| |||| | || || || ||||| ||||| || || ||||| || || ||||| || |
Sbjct 742 AGTCGGTCATGTCCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCT 683
Query 93627 TTT 93629
|||
Sbjct 682 TTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556526217149080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |