Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 212 5e-50
seq7704 141 8e-29
seq355 114 1e-20
seq2274 111 1e-19
seq42801 102 7e-17
>seq2144
Length=13752
Score = 212 bits (234), Expect = 5e-50
Identities = 718/1100 (65%), Gaps = 49/1100 (4%)
Strand=Plus/Minus
Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837
||| || || ||||| | |||||| | ||||||||||| ||||| | ||| ||||| ||
Sbjct 4932 CTTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCC 4873
Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897
|||||| | ||| |||||| | | | ||||| | |||| | | || | ||
Sbjct 4872 TGTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGG 4813
Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957
|| | | | ||||||||| ||||||||||||||||| || | || ||||| || ||
Sbjct 4812 TTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGC 4753
Query 128958 CATACCAATCAAATTTTTCACTTTC-----ATTTCCCACACCGTTTTGTAAAGCTCTCTC 129012
||| | ||| | ||||| |||||||| || || || || || || | |
Sbjct 4752 CAT-----TTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC 4698
Query 129013 ACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTT 129072
|| | || || || | ||| ||||| || | | ||| |||| || |||| |||
Sbjct 4697 ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTT 4638
Query 129073 CGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132
||| | || | |||| | ||||| | | | ||| ||| | | || |
Sbjct 4637 TTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACA 4578
Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192
|| ||||| || || | || || || | ||| ||||| ||| | || || ||
Sbjct 4577 ACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAA 4518
Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT--GTAAGCCACGCAAA 129250
|||||||| || || | ||| || || || | || || ||||| || | | ||| |
Sbjct 4517 GATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGA 4458
Query 129251 GCGAGTTTCGCAAACCGTGCT-GTTTAATGTCtttt--tttAATTGTGTCCAGTCCCACA 129307
| | || |||| ||||||| | ||| |||| | || | || | ||||||||| |
Sbjct 4457 G--AATTACGCACTCCGTGCTTGCTTA---TCTTCTCCTTGAGTTTCGCCCAGTCCCAGA 4403
Query 129308 TCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGG 129367
||||||| | |||||||| || || || | |||||| || | |||||
Sbjct 4402 GATTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTC 4343
Query 129368 AAAAGTAGGAATCGTGCACGCCGTAAGCTTTT---GCCAATTCGCAACTCGCTTCCAATG 129424
|||| || | | ||| | |||| |||| || || || ||||||||||
Sbjct 4342 CCTCATAGGTCTCATACGTGCCAT---CTTTCTCAGCCAGCTCACAGCTGGCTTCCAATG 4286
Query 129425 CGCCAAAATAAATTGTTTCGGCAATTT-TGGTG-TTCA----ACACTTTGGCCTGGTCGC 129478
||||| | ||||| |||||| ||| | || || |||| |||| |||| || |
Sbjct 4285 CGCCATAGTAAATGGTTTCG--AATATCTGTTGATTCAGAAGACAC----GCCTTATCAC 4232
Query 129479 TTTCGTACGGCATAC-GCA---ACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACA 129534
| || || || |||| ||| | || |||| | || || | ||||||| || |
Sbjct 4231 TCTCATAGGG-ATACCGCATTAAAAT--CAAA-GCATCTGCAAGTCCTTGAACTCCAATT 4176
Query 129535 CCGATGGGTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATG 129594
|| || || |||||| || |||||||| | ||| || || ||||| |||||
Sbjct 4175 CCAATTGGACGATGTCTTAAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATA 4116
Query 129595 TCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAA 129654
|| || || ||||| || || ||| ||||| || || || | ||| | | | ||||
Sbjct 4115 TCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAG 4056
Query 129655 TTGTACTCGCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAG 129714
| |||| | || | || ||| || || ||||| | ||||| |||||||||||
Sbjct 4055 TCGTAC--GTCTTCTCCGGTGTT-ACGAACATATTGAGAGCTATCGATGCCAAATTGCAA 3999
Query 129715 ACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTA 129774
|| ||| | || | | || ||||| |||||||| | |||||| ||||| ||||
Sbjct 3998 ACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTA 3939
Query 129775 ATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTAC 129834
|| ||||||| || | ||| || || || ||| || | ||| ||| | | |||||||
Sbjct 3938 ATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTAC 3879
Query 129835 GGCGTGCCCGTTTCGACTTG 129854
|| ||||| || || |||||
Sbjct 3878 GGTGTGCCAGTCTCCACTTG 3859
>seq7704
Length=29863
Score = 141 bits (156), Expect = 8e-29
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || |||||||| | || ||||| || |||||||||| || ||| | |
Sbjct 18349 GATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTC 18408
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || ||||| || ||||| ||||| || || ||||| || |||||
Sbjct 18409 GGATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCA 18468
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| ||| | || ||||| ||||| || || || ||| |||||| |||||||||||||
Sbjct 18469 GCAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTACAA 18528
Query 22398 CATTCAAAAAGAATCCAC 22415
|||||| ||||| || ||
Sbjct 18529 CATTCAGAAAGAGTCAAC 18546
>seq355
Length=9390
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || ||||| ||||| || || || || || ||||| | ||||| ||| |
Sbjct 9200 AAAATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCT 9259
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | || || | || ||||| ||||||||||||||||| || || |||
Sbjct 9260 TCCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCAGAT 9319
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || ||||| || ||| | |||||| ||| || | || || |||
Sbjct 9320 CAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACTCTGTCGGACTAC 9379
Query 22396 AACATTCAAAA 22406
||||| || ||
Sbjct 9380 AACATCCAGAA 9390
>seq2274
Length=37031
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| ||||| || || || || || || || || |||| | || ||||| |
Sbjct 30156 AAAATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCA 30215
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| |||||| | || || |||| || || || ||||||||||||||||| || |||
Sbjct 30216 TCTGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCAGAT 30275
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || || ||||| ||| | |||||| ||||| | || || |||
Sbjct 30276 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTAC 30335
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || ||| | || || || | || |||| || |||
Sbjct 30336 AACATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTGCGTGGTGGT 30386
>seq42801
Length=1186
Score = 102 bits (112), Expect = 7e-17
Identities = 476/745 (64%), Gaps = 23/745 (3%)
Strand=Plus/Minus
Query 48542 ATCGCCATTGTCAGCGTCGATTTCCCATGCAAAGAGGCCTCCTAAATTGTTGTCTAGCAC 48601
|||||| ||||| |||||||| ||||| | || ||||| || | | || || | |||
Sbjct 760 ATCGCCGTTGTCCGCGTCGATCTCCCAGGAGAATAGGCCGCCCAGCTGCTTATCCAACAC 701
Query 48602 GTATTGACCTTTGTCCATAACAGATTGTACACTATCGTAACTGATGAGATCACCACTGTC 48661
||| | |||||| || | || | || || | |||| ||||| || ||
Sbjct 700 GTACTTGCCTTTGGCCTGCCCCGAGCGGGCATCGTCAAAGGTGATCAGATCGCCGGTGGT 641
Query 48662 CGCTTTGGTCACGTACGCTGCTTTAGCGGTGTCGTCATACCTATATTTGTATTCGT---T 48718
| |||| |||||| | |||| || ||| |||| || | || | | ||| |
Sbjct 640 AGGTTTGAACACGTAAGGCGCTTCCGCCGTGGCGTCGTAGGTGTACTGCCACTCGCCGCT 581
Query 48719 AAT--ACGCGATTGA-ATGTGCCTATAGTCGACGACACCGTCCTCCCACGTCCCGGTAAC 48775
|| || | | | || || | ||||| |||| |||| |||||| || || | ||
Sbjct 580 CATGAACTGGCTGGCGATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGAC 521
Query 48776 GGGGCCGACGGCCACACCGCTAAAGGGGTTATCGTCGCTGTAATCGAGGACACCGGTCCA 48835
|| ||| ||| ||| | || || | | || ||| || || ||||||||
Sbjct 520 CGGCCCGGTGGCGGTGCCGGTGAACGGAATGTTGTTCTGGTAGCCGTTCACCCCGGTCCA 461
Query 48836 TCCGCGACCGTACATTGCCACACCCAATACAATTTTGTTGGGTCTCACGCGTTGGTCCAA 48895
||||| || ||||| || || | || || ||| || | |||| || |||
Sbjct 460 ACCGCGGCCATACATGGCGGTGCCGACGACGATCTTGCCCGGCTTGACGCCCTGCGCCAG 401
Query 48896 AAGAGCATTCACCGCAAAATCCGTAGTGTAA----TGTTCGTTTACATTCCATTTCGGAG 48951
|| |||||||| | |||| ||||| ||| || || ||| ||| |
Sbjct 400 CAGCGCATTCACGCCGTTCACCGTGGTGTAGGCGGTGTCCGGTT----TCCCGGCCGGCG 345
Query 48952 CATACAATGCCGTCTGGTGACCCAAATCAA-CAT-TCGACCAGGCACCCTTAAAATCGTA 49009
||| || || ||||| || |||| | || |||| |||| || | || |||||
Sbjct 344 CATTCAGCGCGGTCTGATGCCCCAGGTTTTTCAGATCGA--AGGCGCCGTAGAAGTCGTA 287
Query 49010 GTTCATTAAAAATATTTTATCTAAATAATTTTGGGCATCGTTGTATTTAACCACGGCAAT 49069
| |||| | || || | | | | | | || || |||||||| ||| | | ||
Sbjct 286 GCTCATCAGGAAGATGTGAACCATCGAGATCTGCGCGACGTTGTATGCCACCTTGTCGAT 227
Query 49070 TTTGTCGTCGCCTGCGCTAATGGCGCTTGTTAATTCAAAATTACGGCCGGTTTCGCGTTC 49129
||||| | ||| ||||| |||||| || | ||| | || ||||||||||| ||
Sbjct 226 CTTGTCCTTGCCGGCGCTGATGGCGGAGGTCAGCTCATACTTGCGGCCGGTTTC-CGCCG 168
Query 49130 A-AGATCGTCGAGCATTTCGCGTAATTCTTTCAAGAGAACAACATAAGTGTGTCCGTCGT 49188
| || | || ||||| | || | |||||||| || | |||||||| | ||||| |
Sbjct 167 ACAGCTGATCCAGCATCGCCCGCAGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTCCT 108
Query 49189 GTTGCGAATCGCCCAACAACGGATTCGCCCCTTTGCCGCCCGGAAATTCCCAATCTATGT 49248
| | ||||| ||| || || |||||||||||||| |||||||| || || |
Sbjct 107 GAGGGCT---GCCCAGATTCGGGTTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATAT 51
Query 49249 CGACGCCGTCGAAAAATTTCCAAGT 49273
| ||||||||||| || ||||| ||
Sbjct 50 CCACGCCGTCGAAGAACTTCCAGGT 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419482116385855
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