Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq19922 194 3e-44 >seq19922 Length=1369 Score = 194 bits (214), Expect = 3e-44 Identities = 391/569 (69%), Gaps = 21/569 (4%) Strand=Plus/Plus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| ||||| ||||||||||||||||| || |||||||| || | | | |||| Sbjct 788 TGGCTTTCTTTGCCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCC 847 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | || ||||| | ||||| || ||||| || ||||||||||| ||||| ||||| | Sbjct 848 AGGAAGTGCAAATCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATG 907 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC-CGTCGAGCGT 42602 | ||||| || ||||| | || || |||| ||||| | |||||| | || |||| Sbjct 908 TCCACTCGGAAATGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATC-AGCGC 966 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || || ||||| ||||| || ||||||||| | ||| ||||| || ||||| Sbjct 967 GACTACCTCTTCAATGCCATTGAAACGATGCCCGCTGTGAAGCGTAAGGCAGATTGGGCT 1026 Query 42663 CTCAACTGGATCGAGAGTCC-CGA----CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 || |||||| ||| ||| |||| || |||||| | | | |||||| Sbjct 1027 CTGTCTTGGATC-----TCCTCGAAGGCGGCAAACTTTGGCGAGCGCATCATTGCCTTTG 1081 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776 | || ||||| |||||||||||| ||| || || || ||||||||||| ||| || Sbjct 1082 CTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGCTGAAGAAGC 1141 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 ||| | |||||||| || ||||||||||| || || ||| | | |||||||| || Sbjct 1142 GTGGTCT-TATGCCCGGTCTTACCTTCTCGAATGAGCTGATCTCCCGCGACGAGGGACTT 1200 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA-AGCCCTCGAAG-G 42894 ||| | || ||||| || ||||| | ||| | || ||| | || | | | Sbjct 1201 CATTGCGATTTTGCTGTGCTTATGTTCCAG---CACTT--GGTACAGCGTCCCAGTCGTG 1255 Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954 |||| || | |||||| |||| || ||| |||| ||| |||| ||||| || | Sbjct 1256 AGCGCATCATCGAGATCATCTCGGATGCTGTGAAGATAGAGCAGGAATTCCTTACAGACG 1315 Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAAC 42983 | || || || || ||||||||| || Sbjct 1316 CTCTACCAGTCAATCTCGTCGGCATGGAC 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943771805595920