Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 194 3e-44
>seq19922
Length=1369
Score = 194 bits (214), Expect = 3e-44
Identities = 391/569 (69%), Gaps = 21/569 (4%)
Strand=Plus/Plus
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
|||| ||||| ||||||||||||||||| || |||||||| || | | | ||||
Sbjct 788 TGGCTTTCTTTGCCGCCTCTGACGGCATTGTTAATGAGAATCTTGTCGAGCGCTTCAGCC 847
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
| || ||||| | ||||| || ||||| || ||||||||||| ||||| ||||| |
Sbjct 848 AGGAAGTGCAAATCACAGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATG 907
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC-CGTCGAGCGT 42602
| ||||| || ||||| | || || |||| ||||| | |||||| | || ||||
Sbjct 908 TCCACTCGGAAATGTACAGCGTGCTCATCGACACTTACATTCGGGATCCGCATC-AGCGC 966
Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662
|| || ||||| ||||| || ||||||||| | ||| ||||| || |||||
Sbjct 967 GACTACCTCTTCAATGCCATTGAAACGATGCCCGCTGTGAAGCGTAAGGCAGATTGGGCT 1026
Query 42663 CTCAACTGGATCGAGAGTCC-CGA----CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717
|| |||||| ||| ||| |||| || |||||| | | | ||||||
Sbjct 1027 CTGTCTTGGATC-----TCCTCGAAGGCGGCAAACTTTGGCGAGCGCATCATTGCCTTTG 1081
Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776
| || ||||| |||||||||||| ||| || || || ||||||||||| ||| ||
Sbjct 1082 CTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTTTGCGTCGATCTTCTGGCTGAAGAAGC 1141
Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836
||| | |||||||| || ||||||||||| || || ||| | | |||||||| ||
Sbjct 1142 GTGGTCT-TATGCCCGGTCTTACCTTCTCGAATGAGCTGATCTCCCGCGACGAGGGACTT 1200
Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA-AGCCCTCGAAG-G 42894
||| | || ||||| || ||||| | ||| | || ||| | || | | |
Sbjct 1201 CATTGCGATTTTGCTGTGCTTATGTTCCAG---CACTT--GGTACAGCGTCCCAGTCGTG 1255
Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954
|||| || | |||||| |||| || ||| |||| ||| |||| ||||| || |
Sbjct 1256 AGCGCATCATCGAGATCATCTCGGATGCTGTGAAGATAGAGCAGGAATTCCTTACAGACG 1315
Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAAC 42983
| || || || || ||||||||| ||
Sbjct 1316 CTCTACCAGTCAATCTCGTCGGCATGGAC 1344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943771805595920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |