Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq6480 122 8e-23
>seq6480
Length=6706
Score = 122 bits (134), Expect = 8e-23
Identities = 303/456 (66%), Gaps = 8/456 (2%)
Strand=Plus/Minus
Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194
||||| || ||||| ||| | || ||| | ||||||||||| ||| | |||
Sbjct 826 GGAAACGGGCGTGGCTCGCGGCTTAGTTGCTCCTTTAGTGGCTCTACATGATTCGAATAG 767
Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254
| || ||||| ||||| ||||| | ||| || || ||| | ||||| ||||| ||
Sbjct 766 ACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGGGCG 707
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| || || | || | |||| ||||||||||| ||||| || | ||||||||
Sbjct 706 ATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATGTCC 647
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAG-CT-----ACATAAAATTGA 20368
| | ||||||||||||||| || || ||||| || || |||||||| ||
Sbjct 646 GCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAACTGC 587
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428
| |||| || ||||| || |||||| | | ||| | || ||||| |||| |
Sbjct 586 GCCAGGCAGTGGCACGGCGGCAGAGCCATCTTGGGTATATCCACTGGATTCCATGCACTC 527
Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488
|| ||||| | || ||| ||||| || ||| || | || | || |||
Sbjct 526 ATTATGATGCGTCGATCAGAGGGATTGTTGCGTATGGTGTCGATAACCTGTTGCAGTTGA 467
Query 20489 TCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACG-TACGCCGCCCCAAAGTGCCT 20547
|||| |||| ||| | || ||| ||| || ||| || || || || || || |
Sbjct 466 TCAATGCCCTCGCCATTGTAATCATCAT-TGCAAGTACGATATGCGGCACCGAAATGACG 408
Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
||| || ||||| |||| || |||||||| || ||
Sbjct 407 CCATTGAAAACCATAAATGGGACCCAAATCACCTTC 372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441107606670280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |