Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6480 122 8e-23 >seq6480 Length=6706 Score = 122 bits (134), Expect = 8e-23 Identities = 303/456 (66%), Gaps = 8/456 (2%) Strand=Plus/Minus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 ||||| || ||||| ||| | || ||| | ||||||||||| ||| | ||| Sbjct 826 GGAAACGGGCGTGGCTCGCGGCTTAGTTGCTCCTTTAGTGGCTCTACATGATTCGAATAG 767 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 | || ||||| ||||| ||||| | ||| || || ||| | ||||| ||||| || Sbjct 766 ACATGAGCATCGCCCAAGGTGTGCACAAAGTCACCAGGTTTGTACCCAGTGACATGGGCG 707 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| || || | || | |||| ||||||||||| ||||| || | |||||||| Sbjct 706 ATCATGTAGGTGAGCAGTGCATAGGATGCAATGTTAAAGGGAACGCCGAGTCCCATGTCC 647 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAG-CT-----ACATAAAATTGA 20368 | | ||||||||||||||| || || ||||| || || |||||||| || Sbjct 646 GCACTGCGCTGATACAGCTGACACGAGAGTTCACCACGAGACTGTGAGACATAAAACTGC 587 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428 | |||| || ||||| || |||||| | | ||| | || ||||| |||| | Sbjct 586 GCCAGGCAGTGGCACGGCGGCAGAGCCATCTTGGGTATATCCACTGGATTCCATGCACTC 527 Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488 || ||||| | || ||| ||||| || ||| || | || | || ||| Sbjct 526 ATTATGATGCGTCGATCAGAGGGATTGTTGCGTATGGTGTCGATAACCTGTTGCAGTTGA 467 Query 20489 TCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACG-TACGCCGCCCCAAAGTGCCT 20547 |||| |||| ||| | || ||| ||| || ||| || || || || || || | Sbjct 466 TCAATGCCCTCGCCATTGTAATCATCAT-TGCAAGTACGATATGCGGCACCGAAATGACG 408 Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 ||| || ||||| |||| || |||||||| || || Sbjct 407 CCATTGAAAACCATAAATGGGACCCAAATCACCTTC 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441107606670280