Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq17479 185 2e-42 seq47809 95.1 3e-15 >seq17479 Length=734 Score = 185 bits (204), Expect = 2e-42 Identities = 280/390 (72%), Gaps = 9/390 (2%) Strand=Plus/Plus Query 26661 ATTGGCCTGATCCACCCGCACCCGGTCGATCACCTCACGCCCATACTTGGCCACGACGTG 26720 ||| ||||| ||||| ||||||||||| | |||||| || ||||| ||||| ||||| Sbjct 42 ATTCGCCTGCTCCACTCGCACCCGGTCCACCACCTCTCGGCCATAGCGAGCCACCACGTG 101 Query 26721 GAACAAGTCGTAGACCACCTCGGCCTGCGGGCAATGCGCGTTGATCTCCAGTTCGTAGGC 26780 ||||| ||||||||||||||| ||||||||||| || || | |||||| ||| | || Sbjct 102 GAACAGGTCGTAGACCACCTCCGCCTGCGGGCAGTGTTGCTTCACCTCCAGGTCGAACGC 161 Query 26781 GGTCGTCATGTCGATTGCCACCGCCTCGATGCGCTGGGCAACGCCCTCCGGAAGCTGTTC 26840 || ||||||| || ||||||||||| || ||| |||| ||| | ||| ||||| || Sbjct 162 CGTGTTCATGTCCATCGCCACCGCCTCAATCTGCT-GGCATCGCTCGCCG--AGCTGCTC 218 Query 26841 GAAGAAGGCGCGGGCAGTCTCGCGCGAGCGCCCCGGCCCGATCCAGAGCACCTGCCGG-C 26899 |||||||| ||| || | || | || |||| | ||| || || || || Sbjct 219 GAAGAAGGGACGGATAGCGGCCCGGCTGTTGCCGTGCCCCACCCACAGGAC--GCGGGTT 276 Query 26900 CGATCGG-ATCAACGACCACCGTGGCATAGCGATGGCCTTTATGGAGTGCGAACTCGTCC 26958 || |||| ||| | || ||| ||||||||||| || || || || || || ||||| ||| Sbjct 277 CGCTCGGCATCCATGATCACGGTGGCATAGCGGTGTCCCTTGTGCAGGGCAAACTCATCC 336 Query 26959 ATCGCCAGATAACGGATCGTCGACCAGTCCGGT-TCGACCACACGCGCTCGCAAGCGCAT 27017 ||| |||| || | | || | ||| || | | |||||| | |||| || Sbjct 337 ATCACCAGCCGCCGCA-CCTCCCCAAGTTCGATGGTGCCCACACTGGTCTGCAAACGGCG 395 Query 27018 CTTGTCGATCGATTTGACCGTGTGCCAGCC 27047 |||||||||| |||| |||||||| || Sbjct 396 CTTGTCGATCTCCTTGATGGTGTGCCAACC 425 >seq47809 Length=786 Score = 95.1 bits (104), Expect = 3e-15 Identities = 120/160 (75%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 14430 CTGGCCGAGCGGAAAGACTACTTTG-TGTCGCTGCACCCCGCCGACCAGCGGGACGCCG- 14487 |||||||| || || | | || || | || || |||| | || ||||| || ||| Sbjct 10 CTGGCCGATCGCAAGGCC-ACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCAT 68 Query 14488 CGCGCGCCACGCTGGCGCTGGAATCCGAGCCGATCACCAAGCTCTTGCAGGAGAACGCCT 14547 ||| ||| || ||||||||||||| ||||||||| ||| || ||||| || || || | Sbjct 69 CGCCCGC-ACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTT 127 Query 14548 ACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGC 14587 ||||||| ||| ||| |||||||||||||| || || || Sbjct 128 ACCGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGC 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123839672485788