Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_009382.1
Length=38760
Score E
Sequences producing significant alignments: (Bits) Value
seq17479 185 2e-42
seq47809 95.1 3e-15
>seq17479
Length=734
Score = 185 bits (204), Expect = 2e-42
Identities = 280/390 (72%), Gaps = 9/390 (2%)
Strand=Plus/Plus
Query 26661 ATTGGCCTGATCCACCCGCACCCGGTCGATCACCTCACGCCCATACTTGGCCACGACGTG 26720
||| ||||| ||||| ||||||||||| | |||||| || ||||| ||||| |||||
Sbjct 42 ATTCGCCTGCTCCACTCGCACCCGGTCCACCACCTCTCGGCCATAGCGAGCCACCACGTG 101
Query 26721 GAACAAGTCGTAGACCACCTCGGCCTGCGGGCAATGCGCGTTGATCTCCAGTTCGTAGGC 26780
||||| ||||||||||||||| ||||||||||| || || | |||||| ||| | ||
Sbjct 102 GAACAGGTCGTAGACCACCTCCGCCTGCGGGCAGTGTTGCTTCACCTCCAGGTCGAACGC 161
Query 26781 GGTCGTCATGTCGATTGCCACCGCCTCGATGCGCTGGGCAACGCCCTCCGGAAGCTGTTC 26840
|| ||||||| || ||||||||||| || ||| |||| ||| | ||| ||||| ||
Sbjct 162 CGTGTTCATGTCCATCGCCACCGCCTCAATCTGCT-GGCATCGCTCGCCG--AGCTGCTC 218
Query 26841 GAAGAAGGCGCGGGCAGTCTCGCGCGAGCGCCCCGGCCCGATCCAGAGCACCTGCCGG-C 26899
|||||||| ||| || | || | || |||| | ||| || || || ||
Sbjct 219 GAAGAAGGGACGGATAGCGGCCCGGCTGTTGCCGTGCCCCACCCACAGGAC--GCGGGTT 276
Query 26900 CGATCGG-ATCAACGACCACCGTGGCATAGCGATGGCCTTTATGGAGTGCGAACTCGTCC 26958
|| |||| ||| | || ||| ||||||||||| || || || || || || ||||| |||
Sbjct 277 CGCTCGGCATCCATGATCACGGTGGCATAGCGGTGTCCCTTGTGCAGGGCAAACTCATCC 336
Query 26959 ATCGCCAGATAACGGATCGTCGACCAGTCCGGT-TCGACCACACGCGCTCGCAAGCGCAT 27017
||| |||| || | | || | ||| || | | |||||| | |||| ||
Sbjct 337 ATCACCAGCCGCCGCA-CCTCCCCAAGTTCGATGGTGCCCACACTGGTCTGCAAACGGCG 395
Query 27018 CTTGTCGATCGATTTGACCGTGTGCCAGCC 27047
|||||||||| |||| |||||||| ||
Sbjct 396 CTTGTCGATCTCCTTGATGGTGTGCCAACC 425
>seq47809
Length=786
Score = 95.1 bits (104), Expect = 3e-15
Identities = 120/160 (75%), Gaps = 4/160 (3%)
Strand=Plus/Plus
Query 14430 CTGGCCGAGCGGAAAGACTACTTTG-TGTCGCTGCACCCCGCCGACCAGCGGGACGCCG- 14487
|||||||| || || | | || || | || || |||| | || ||||| || |||
Sbjct 10 CTGGCCGATCGCAAGGCC-ACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCAT 68
Query 14488 CGCGCGCCACGCTGGCGCTGGAATCCGAGCCGATCACCAAGCTCTTGCAGGAGAACGCCT 14547
||| ||| || ||||||||||||| ||||||||| ||| || ||||| || || || |
Sbjct 69 CGCCCGC-ACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTT 127
Query 14548 ACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGC 14587
||||||| ||| ||| |||||||||||||| || || ||
Sbjct 128 ACCGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGC 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123839672485788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |