Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq102 107 2e-18
seq323 104 2e-17
>seq102
Length=36553
Score = 107 bits (118), Expect = 2e-18
Identities = 179/259 (69%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 37840 TGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCA 37899
|||||||| | || || | || || || | ||||| |||||||| | ||||||
Sbjct 13055 TGTGGAACTCTGCACAGTTGCAACTGGTCAGGGAGGGCAAGATGCACGGATTCCTGCGCA 12996
Query 37900 TGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACG 37959
|||| ||| ||||||||| | || ||| |||| | | || ||| | | |||
Sbjct 12995 TGTACTGGGCGAAGAAAATTCTCGAGTGGACTGAGACTCCCGAGCAGGCGTTGGAGTACT 12936
Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019
||| |||||||||||||||||| |||| || || |||||||| || ||||||||||
Sbjct 12935 GCATACTACTCAATGATAAGTACAGCCTGGATGGACGGGATCCCAATGGGTACGTCGGCT 12876
Query 38020 GTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCA 38079
| ||||||| | | || | || ||| | |||| ||| ||| | ||||
Sbjct 12875 GCATGTGGTCAGTTGGTGGCGTTCATGATCAGGGCTGGAAGGAGCGCGACATCTTTGGCA 12816
Query 38080 AGATTCGGTACATGAACTA 38098
|||| || |||||||||||
Sbjct 12815 AGATACGATACATGAACTA 12797
>seq323
Length=8557
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1372 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1313
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619
| |||||||||| |||||| || | ||| ||
Sbjct 1312 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1282
Score = 104 bits (114), Expect = 2e-17
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct 1372 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1313
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422
| |||||||||| |||||| || | ||| ||
Sbjct 1312 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396829794269734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |