Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq102 107 2e-18 seq323 104 2e-17 >seq102 Length=36553 Score = 107 bits (118), Expect = 2e-18 Identities = 179/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 37840 TGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCA 37899 |||||||| | || || | || || || | ||||| |||||||| | |||||| Sbjct 13055 TGTGGAACTCTGCACAGTTGCAACTGGTCAGGGAGGGCAAGATGCACGGATTCCTGCGCA 12996 Query 37900 TGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACG 37959 |||| ||| ||||||||| | || ||| |||| | | || ||| | | ||| Sbjct 12995 TGTACTGGGCGAAGAAAATTCTCGAGTGGACTGAGACTCCCGAGCAGGCGTTGGAGTACT 12936 Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019 ||| |||||||||||||||||| |||| || || |||||||| || |||||||||| Sbjct 12935 GCATACTACTCAATGATAAGTACAGCCTGGATGGACGGGATCCCAATGGGTACGTCGGCT 12876 Query 38020 GTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCA 38079 | ||||||| | | || | || ||| | |||| ||| ||| | |||| Sbjct 12875 GCATGTGGTCAGTTGGTGGCGTTCATGATCAGGGCTGGAAGGAGCGCGACATCTTTGGCA 12816 Query 38080 AGATTCGGTACATGAACTA 38098 |||| || ||||||||||| Sbjct 12815 AGATACGATACATGAACTA 12797 >seq323 Length=8557 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 1372 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1313 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 1312 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1282 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 1372 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 1313 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 1312 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396829794269734