Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq36937 158 5e-34 >seq36937 Length=675 Score = 158 bits (174), Expect = 5e-34 Identities = 237/332 (71%), Gaps = 6/332 (2%) Strand=Plus/Minus Query 60048 TCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGC 60107 || ||||| | | | || |||||| | || ||| || || ||||| ||| ||| Sbjct 601 TCAGACAGCGGCGTGCCATACACCCGTTCGACGTCGTAGGGCGAGAACAGGTACATTTCT 542 Query 60108 TCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTC 60167 ||| | | ||| || || ||| |||| || || | | || || || || || || Sbjct 541 TCGTTGTTCTTCGCCAGCTCGAAGGTGATGTCCGGGATCACTACCCCCAGCGACAGCGTT 482 Query 60168 TTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCCAG-GAACGCAAGGATGTC 60226 || || ||||||||||||||||||||||| |||||||| || || ||||| ||||| || Sbjct 481 TTGATGCGGATCTTCTCGTCGGCGTTTTCCCGCTTGGTGTCGAGAAAACGC-AGGATATC 423 Query 60227 GGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGA 60286 |||||||| ||||| | ||| ||||| || || ||||| | || || || ||||| | Sbjct 422 CGGGTGGTGGGCGTTGAGATACACCGCGCCGGCCCCCTGGCGCGCGCCGAGCTGGTTGGC 363 Query 60287 GTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTC 60346 |||||||||| ||||| || || ||||| | || ||||| || |||| ||| ||| Sbjct 362 GTAGGAGAAGGCGTCTTCGAGCATTTTCATGATCGGAATGACGCCGGAGGACTG--GTTC 305 Query 60347 TCGA--CCCTTAATCGGAGCTCCTGCCTCGCG 60376 |||| | ||| |||| || || |||| || Sbjct 304 TCGATGCGCTTGCTCGGCGCGCCCACCTCACG 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225595764798980