Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2274 111 2e-19 seq7704 109 5e-19 seq2144 96.9 3e-15 >seq2274 Length=37031 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| | || | || || || || || |||||||| || | Sbjct 30386 ACCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 30327 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || ||||||||||| || | || || |||||||| || ||||| Sbjct 30326 AAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 30267 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| ||| | |||||| | ||||| Sbjct 30266 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCAC 30207 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||||||||| ||||| || || |||||||| |||||||| Sbjct 30206 CTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTT 30156 >seq7704 Length=29863 Score = 109 bits (120), Expect = 5e-19 Identities = 147/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| |||||||||||||| | || ||||| | ||||| | |||||||| Sbjct 18546 GTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCA 18487 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | |||||||| || ||||||||||||||||| || || | | || ||||| Sbjct 18486 GCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTG-AATCTTGGCTTT 18428 Query 64367 -ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423 ||| || | |||| ||| || || || || | ||| | |||||| || || | Sbjct 18427 GACATTTTCGATGGTAT--CCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGG 18370 Query 64424 GTTTTTACGAAAATTTGCAT 64443 ||||| ||||| || ||||| Sbjct 18369 GTTTTAACGAAGATCTGCAT 18350 >seq2144 Length=13752 Score = 96.9 bits (106), Expect = 3e-15 Identities = 863/1402 (62%), Gaps = 34/1402 (2%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| | || ||||| ||||| || || || | ||| || ||||| | ||| || ||||| Sbjct 4532 GTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATT 4473 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || | | || ||| || |||| ||||| || || | || | | ||| Sbjct 4472 GGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCC 4413 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 || | ||| | || || ||| | |||||||| || || || | || |||| || Sbjct 4412 CAGTCCCAGAGATTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTA 4353 Query 154251 GCCGGACTGTCACT-ATAACTAGAGTACG-GCC--CGTTCAGTTTTGCCAAGTCGCAACT 154306 | ||||| || || ||| | |||| ||| | ||| | |||| || || || Sbjct 4352 ACTGGACT-TCCCTCATAGGTCTCATACGTGCCATCTTTC---TCAGCCAGCTCACAGCT 4297 Query 154307 GGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTT 154366 |||||| || || ||||||| | ||||||| || |||| || | | || || Sbjct 4296 GGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTT 4237 Query 154367 GTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCAC 154426 ||||| || || || | | || || | |||||||| || || ||||||| || | Sbjct 4236 ATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAAT 4177 Query 154427 TCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTC---CAGAGGATAATAATT 154483 ||||| || | ||| |||| || |||| || |||||| |||||| || ||||| Sbjct 4176 TCCAATTGGACGATGTCTTAAGTTGGATTTCTT---AGCCTCGGGCAGAGGGTAGTAATT 4120 Query 154484 GATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGAC 154543 ||||||||| || || || | || Sbjct 4119 GATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCAC 4060 Query 154544 AAAATCAAAC----ACTCCGCTTTTAATAAAACGATTTACACACACAGACGCCAAGTTGC 154599 ||| || || ||||| | ||| || | ||| | | | || ||||| |||| Sbjct 4059 AAAGTCGTACGTCTTCTCCGGTGTTACGAACA-TATTGAGAGCTATCGATGCCAAATTGC 4001 Query 154600 AAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATC 154659 |||| ||||| || || | | || | |||||||| | |||||| ||||||||| Sbjct 4000 AAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATT 3941 Query 154660 GAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGT 154719 ||| ||||||| |||| || || ||| ||| || | || ||| | | |||| Sbjct 3940 TAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGT 3881 Query 154720 ACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAA--ACAGACTTCGCGCCTC 154777 |||| ||||| || |||||||| | ||||| || || || | || | | |||| Sbjct 3880 ACGGTGTGCCAGTCTCCACTTGTGACTCAATGAT--GGCAAACCAAAGGGATTGAGCCTT 3823 Query 154778 AACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAA 154837 | || | | |||| || |||| |||| | || || | ||||||| Sbjct 3822 GATAACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATC 3763 Query 154838 ACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTT 154897 || | || || | | || ||||| || || ||||||| |||||| || || Sbjct 3762 ACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATT 3703 Query 154898 TTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC 154957 || ||||| |||||||||||||| || | ||||| || || |||| ||| || || Sbjct 3702 GGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCGAGC 3643 Query 154958 CTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTG 155017 | || || ||| |||| ||| | || ||| || ||| | | |||| || Sbjct 3642 ACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATG 3583 Query 155018 CCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTCCTTGATCCACGTG 155074 ||| ||||| | || | ||| | || || | ||| || || |||||||| | Sbjct 3582 CCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATA 3523 Query 155075 ACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGT 155134 ||| | ||| || | || | || || || ||| ||| ||| || || ||||| Sbjct 3522 ACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGT 3463 Query 155135 GCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCC 155194 ||||| |||| | || || || ||| ||||| | || | ||| || | Sbjct 3462 GCCACTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCACCTGC 3403 Query 155195 GTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTC 155254 | || || || |||||| | | ||| || || | ||||| | ||| ||| Sbjct 3402 TGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGA 3343 Query 155255 TTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAA 155314 | || || | | || || ||||| | ||||| | | | | || || || | Sbjct 3342 TACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAG 3283 Query 155315 TGTAGGACTAGCGTGTGT----AAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGG 155370 ||| || || ||||| || | || | || || |||||||| || | | Sbjct 3282 TGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGC----AAATTGTAAGTCTCCAGTG 3227 Query 155371 CGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGC 155430 ||| ||||| ||| || ||||||||||| || || |||||||||||||| || | Sbjct 3226 CGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGAC 3167 Query 155431 GCTCCGCAACGCGGCCGTTGAT 155452 | || ||||| ||| ||||| Sbjct 3166 GTTCAGCAACTTTGCCATTGAT 3145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499344594667480