Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 111 2e-19
seq7704 109 5e-19
seq2144 96.9 3e-15
>seq2274
Length=37031
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| | || | || || || || || |||||||| || |
Sbjct 30386 ACCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGA 30327
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || ||||||||||| || | || || |||||||| || |||||
Sbjct 30326 AAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 30267
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| ||| | |||||| | |||||
Sbjct 30266 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCAC 30207
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | ||||||||| ||||| || || |||||||| ||||||||
Sbjct 30206 CTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCATTTT 30156
>seq7704
Length=29863
Score = 109 bits (120), Expect = 5e-19
Identities = 147/200 (74%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| |||||||||||||| | || ||||| | ||||| | ||||||||
Sbjct 18546 GTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCA 18487
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | |||||||| || ||||||||||||||||| || || | | || |||||
Sbjct 18486 GCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTG-AATCTTGGCTTT 18428
Query 64367 -ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAA 64423
||| || | |||| ||| || || || || | ||| | |||||| || || |
Sbjct 18427 GACATTTTCGATGGTAT--CCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGG 18370
Query 64424 GTTTTTACGAAAATTTGCAT 64443
||||| ||||| || |||||
Sbjct 18369 GTTTTAACGAAGATCTGCAT 18350
>seq2144
Length=13752
Score = 96.9 bits (106), Expect = 3e-15
Identities = 863/1402 (62%), Gaps = 34/1402 (2%)
Strand=Plus/Minus
Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130
||| | || ||||| ||||| || || || | ||| || ||||| | ||| || |||||
Sbjct 4532 GTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATT 4473
Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190
|| | | || ||| || |||| ||||| || || | || | | |||
Sbjct 4472 GGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCC 4413
Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250
|| | ||| | || || ||| | |||||||| || || || | || |||| ||
Sbjct 4412 CAGTCCCAGAGATTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTA 4353
Query 154251 GCCGGACTGTCACT-ATAACTAGAGTACG-GCC--CGTTCAGTTTTGCCAAGTCGCAACT 154306
| ||||| || || ||| | |||| ||| | ||| | |||| || || ||
Sbjct 4352 ACTGGACT-TCCCTCATAGGTCTCATACGTGCCATCTTTC---TCAGCCAGCTCACAGCT 4297
Query 154307 GGCTTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTT 154366
|||||| || || ||||||| | ||||||| || |||| || | | || ||
Sbjct 4296 GGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTT 4237
Query 154367 GTCACTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCAC 154426
||||| || || || | | || || | |||||||| || || ||||||| || |
Sbjct 4236 ATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAAT 4177
Query 154427 TCCAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTC---CAGAGGATAATAATT 154483
||||| || | ||| |||| || |||| || |||||| |||||| || |||||
Sbjct 4176 TCCAATTGGACGATGTCTTAAGTTGGATTTCTT---AGCCTCGGGCAGAGGGTAGTAATT 4120
Query 154484 GATATCGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGAC 154543
||||||||| || || || | ||
Sbjct 4119 GATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCAC 4060
Query 154544 AAAATCAAAC----ACTCCGCTTTTAATAAAACGATTTACACACACAGACGCCAAGTTGC 154599
||| || || ||||| | ||| || | ||| | | | || ||||| ||||
Sbjct 4059 AAAGTCGTACGTCTTCTCCGGTGTTACGAACA-TATTGAGAGCTATCGATGCCAAATTGC 4001
Query 154600 AAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATC 154659
|||| ||||| || || | | || | |||||||| | |||||| |||||||||
Sbjct 4000 AAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATT 3941
Query 154660 GAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGT 154719
||| ||||||| |||| || || ||| ||| || | || ||| | | ||||
Sbjct 3940 TAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGT 3881
Query 154720 ACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAA--ACAGACTTCGCGCCTC 154777
|||| ||||| || |||||||| | ||||| || || || | || | | ||||
Sbjct 3880 ACGGTGTGCCAGTCTCCACTTGTGACTCAATGAT--GGCAAACCAAAGGGATTGAGCCTT 3823
Query 154778 AACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAA 154837
| || | | |||| || |||| |||| | || || | |||||||
Sbjct 3822 GATAACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATC 3763
Query 154838 ACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTT 154897
|| | || || | | || ||||| || || ||||||| |||||| || ||
Sbjct 3762 ACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATT 3703
Query 154898 TTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGC 154957
|| ||||| |||||||||||||| || | ||||| || || |||| ||| || ||
Sbjct 3702 GGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCGAGC 3643
Query 154958 CTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTG 155017
| || || ||| |||| ||| | || ||| || ||| | | |||| ||
Sbjct 3642 ACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATG 3583
Query 155018 CCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TCCTCCTTGATCCACGTG 155074
||| ||||| | || | ||| | || || | ||| || || |||||||| |
Sbjct 3582 CCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATA 3523
Query 155075 ACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGT 155134
||| | ||| || | || | || || || ||| ||| ||| || || |||||
Sbjct 3522 ACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGT 3463
Query 155135 GCCACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCC 155194
||||| |||| | || || || ||| ||||| | || | ||| || |
Sbjct 3462 GCCACTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCACCTGC 3403
Query 155195 GTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTC 155254
| || || || |||||| | | ||| || || | ||||| | ||| |||
Sbjct 3402 TGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGA 3343
Query 155255 TTTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAA 155314
| || || | | || || ||||| | ||||| | | | | || || || |
Sbjct 3342 TACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAG 3283
Query 155315 TGTAGGACTAGCGTGTGT----AAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGG 155370
||| || || ||||| || | || | || || |||||||| || | |
Sbjct 3282 TGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGC----AAATTGTAAGTCTCCAGTG 3227
Query 155371 CGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGC 155430
||| ||||| ||| || ||||||||||| || || |||||||||||||| || |
Sbjct 3226 CGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTGGAC 3167
Query 155431 GCTCCGCAACGCGGCCGTTGAT 155452
| || ||||| ||| |||||
Sbjct 3166 GTTCAGCAACTTTGCCATTGAT 3145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499344594667480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |