Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq41861 149 3e-31 >seq41861 Length=755 Score = 149 bits (164), Expect = 3e-31 Identities = 424/648 (65%), Gaps = 23/648 (4%) Strand=Plus/Plus Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023 |||| |||||| || || |||||||| || || || || || || | || || Sbjct 17 CCGATGGGCCGCAGCGTCGAAATCTACGGCCCGGAATCGTCCGGTAAAACCACCCTGACG 76 Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCC 66080 || || | | | ||| ||| | || || ||||| || || | |||||| ||| Sbjct 77 CTGCAGGTGATCGCC---GCCGCGCAGCGCGAAGGCAAAACCTGTGCGTTCATCGATGCC 133 Query 66081 GAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTG 66140 || || | || || ||| || || | ||| || || ||| ||||||| || Sbjct 134 GAGCACGCGCTGGATCCTATCTATGCGAAGAAGCTGGGCGTCGATATCGACAACCT---- 189 Query 66141 GTTGTGC----AGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAA 66196 | ||||| |||| ||||| ||||||||||| ||||| ||| ||| || | Sbjct 190 GCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCTCTGGAAATCTGTGATGCGCTGACCCG 249 Query 66197 GTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGA 66256 || |||| |||| | ||||| | | || || |||||||| || |||| |||||| Sbjct 250 ATCCGGCGCGGTTGACGTCATCATCGGCGATTCCGTGGCGGCGTTGACGCCGAAGGCGGA 309 Query 66257 GCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGC 66316 ||||||| || ||||| || |||||| | || || || ||| ||||| ||||| Sbjct 310 AATCGAAGGTGAAATCGGCGATTCGCACATGGGGTTGGCGGCGCGCATGATGAGCCAGGC 369 Query 66317 CATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCA 66376 ||||| |||||| |||||| | | |||| || || | | | || || Sbjct 370 GATGCGTAAGCTGGCCGGCAACCTGAAAAATGCCAATACCCTGCTGATCTTCATCAACCA 429 Query 66377 GCTGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGG 66433 | | || ||| || || ||| | ||| |||| || ||||| |||||||| Sbjct 430 GATCCGTATGAAAATTGG---TGTGATGTTCGGCAACCCG---GAAACCACTACCGGTGG 483 Query 66434 TAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAA 66493 ||| |||||| ||||| || ||||||||| ||||| |||| | |||| | || || Sbjct 484 TAACGCTCTGAAGTTCTATGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAA 543 Query 66494 GGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553 || ||||| || | || |||| | || |||||||| || | || ||||| | || Sbjct 544 AGAGGGCGACGAAGTGGTGGGCAGCGAAACCCGCGTGAAAGTGGGGAAAAACAAAATCGC 603 Query 66554 GCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601 | ||| | ||||||||||| ||| | |||||||| ||||| Sbjct 604 TGCGCCGTTCAAACAGGCTGAGTTCCAAATCATGTACGGCGAAGGCAT 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242328356823764