Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_011056.1
Length=75811
Score E
Sequences producing significant alignments: (Bits) Value
seq41861 149 3e-31
>seq41861
Length=755
Score = 149 bits (164), Expect = 3e-31
Identities = 424/648 (65%), Gaps = 23/648 (4%)
Strand=Plus/Plus
Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023
|||| |||||| || || |||||||| || || || || || || | || ||
Sbjct 17 CCGATGGGCCGCAGCGTCGAAATCTACGGCCCGGAATCGTCCGGTAAAACCACCCTGACG 76
Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCC 66080
|| || | | | ||| ||| | || || ||||| || || | |||||| |||
Sbjct 77 CTGCAGGTGATCGCC---GCCGCGCAGCGCGAAGGCAAAACCTGTGCGTTCATCGATGCC 133
Query 66081 GAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTG 66140
|| || | || || ||| || || | ||| || || ||| ||||||| ||
Sbjct 134 GAGCACGCGCTGGATCCTATCTATGCGAAGAAGCTGGGCGTCGATATCGACAACCT---- 189
Query 66141 GTTGTGC----AGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAA 66196
| ||||| |||| ||||| ||||||||||| ||||| ||| ||| || |
Sbjct 190 GCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCTCTGGAAATCTGTGATGCGCTGACCCG 249
Query 66197 GTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGA 66256
|| |||| |||| | ||||| | | || || |||||||| || |||| ||||||
Sbjct 250 ATCCGGCGCGGTTGACGTCATCATCGGCGATTCCGTGGCGGCGTTGACGCCGAAGGCGGA 309
Query 66257 GCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGC 66316
||||||| || ||||| || |||||| | || || || ||| ||||| |||||
Sbjct 310 AATCGAAGGTGAAATCGGCGATTCGCACATGGGGTTGGCGGCGCGCATGATGAGCCAGGC 369
Query 66317 CATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCA 66376
||||| |||||| |||||| | | |||| || || | | | || ||
Sbjct 370 GATGCGTAAGCTGGCCGGCAACCTGAAAAATGCCAATACCCTGCTGATCTTCATCAACCA 429
Query 66377 GCTGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATGAGACCACCACCGGTGG 66433
| | || ||| || || ||| | ||| |||| || ||||| ||||||||
Sbjct 430 GATCCGTATGAAAATTGG---TGTGATGTTCGGCAACCCG---GAAACCACTACCGGTGG 483
Query 66434 TAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAA 66493
||| |||||| ||||| || ||||||||| ||||| |||| | |||| | || ||
Sbjct 484 TAACGCTCTGAAGTTCTATGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAA 543
Query 66494 GGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGC 66553
|| ||||| || | || |||| | || |||||||| || | || ||||| | ||
Sbjct 544 AGAGGGCGACGAAGTGGTGGGCAGCGAAACCCGCGTGAAAGTGGGGAAAAACAAAATCGC 603
Query 66554 GCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCAT 66601
| ||| | ||||||||||| ||| | |||||||| |||||
Sbjct 604 TGCGCCGTTCAAACAGGCTGAGTTCCAAATCATGTACGGCGAAGGCAT 651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242328356823764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |