Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 179 4e-40
seq2144 150 2e-31
seq2274 89.7 5e-13
seq7704 87.8 2e-12
>seq42801
Length=1186
Score = 179 bits (198), Expect = 4e-40
Identities = 527/795 (66%), Gaps = 44/795 (6%)
Strand=Plus/Plus
Query 28418 GACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGACATCGATTGGGAGTTTCCGGGC 28477
|| || |||| |||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct 14 GAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGAATTCCCGGGC 73
Query 28478 GGCAAAGGAGCCAATCCCGATGTCGGCAACGCCGAGCGCGACCGCGCCACCTACACTGC- 28536
|||||||| ||||| || || | |||| | | || ||| | | || || |||
Sbjct 74 GGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAG---GACGGGGAAACTTA-TGTGCT 129
Query 28537 CCTGCTGCACGAGCTGCGCATCCAACTGGA--CGCCCTCGGCGCTCGCACCGACCGCTAC 28594
||| || | || ||||| ||||| || |||||| |||| |||| |
Sbjct 130 GCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCG--GAAACCGGCCGCAAG 187
Query 28595 TATCCGCTGACGTCGGCCATCAGCGCGGGCAACGACAAGATCGCCGTGGTCGATTACGCC 28654
||| |||||| || ||||||||||| ||||| |||||||||| | ||| | ||| |
Sbjct 188 TATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGCATACAAC 247
Query 28655 GAAGCGCAAAAGTACCTCGA-----CACGATTTTTCTCATGACGTACGATTTCAAAGGCG 28709
| ||||| | ||||| ||| || || || |||| ||||| ||| | ||||
Sbjct 248 GTCGCGCA----GATCTCGATGGTTCAC-ATCTTCCTGATGAGCTACGACTTCTACGGCG 302
Query 28710 -CGTGGAGC--AACACCGATCTGGGCCATCAGGCGGCACTGTTTGCGCCCGCGTGGCGTC 28766
| | || | || | | ||||| |||||| | || ||| |||||| || || |
Sbjct 303 CCTTCGATCTGAAAA---ACCTGGGGCATCAGACCGCGCTGAATGCGCCGGCCGGGAAAC 359
Query 28767 CCGACGAACCGTATTGCGCCGACCGT----GCCGTCGAGGCGCTTCTCGACCAGAACGTT 28822
| ||| |||| | | || || || | ||| | ||||| || | ||| || |
Sbjct 360 CGGAC--ACCG-CCTACACC-ACGGTGAACGGCGTGAATGCGCTGCTGGCGCAGGGCG-T 414
Query 28823 CCCGCC-GGCAAAATAGCCATCGGCGTCGCCATGTACGGTCGCGGCTGGACCGGGGTGAC 28881
| ||| ||||| || | | ||||| ||||||||| || ||||| |||||||||||||
Sbjct 415 CAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGACCGGGGTGAA 474
Query 28882 GGGCGACGACAAAAAC---CCATTCCTGGGCGTCGCTACCGGGCCCGTGCCCGGCACTTG 28938
||| || | || ||| || ||| ||| ||| |||||||| || ||||| ||
Sbjct 475 CGGCTACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTCAAAGGCACCTG 534
Query 28939 GGAGGCGGGCGTCGTGGACTATCGACAGATCGTGCACAACCTCA------CCCAATACAA 28992
|||| ||| |||||||||| || ||||||| | | ||| | | | |
Sbjct 535 GGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGCGGCGAGTGGCA 594
Query 28993 CTATTACTACGACGAAATGGCGAAAGGCGCGTACGTGTATAATCGCGAAAACGGCAACCT 29052
|| |||||||| | |||| ||| | ||||||| || | | |||| | ||
Sbjct 595 GTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGTTCAAACCTACCACCGGCGATCT 654
Query 29053 AGTCACTTACGACAATCCGAAATCTGTAGCCGACAAGACCAAGTATGTGCTCGATCATGA 29112
|||| | ||| || | || | | ||| |||||| ||| | ||| | |
Sbjct 655 GATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGTGTTGGATAAGCA 714
Query 29113 ACTGGCGGGCGTTTTCAGTTGGGAAATCGACGCCGACAACGGAGACCTTCTCAACGCCAT 29172
|||| ||| | ||| ||||| |||||||| |||||||| || |||||||| |||
Sbjct 715 GCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGATATTCTCAACAGCAT 774
Query 29173 CAACAAAGGCCTGGG 29187
||| |||||||
Sbjct 775 GAACGCCAGCCTGGG 789
>seq2144
Length=13752
Score = 150 bits (166), Expect = 2e-31
Identities = 808/1272 (64%), Gaps = 47/1272 (4%)
Strand=Plus/Minus
Query 152709 GCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAA 152768
|| || ||||| ||||| | ||||||||| || ||||| || || ||| ||| |
Sbjct 4904 GCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTAAGACCCGCTTTCCAGGAGAAG 4845
Query 152769 TTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGG 152828
||||| || |||| | | | || | |||| || || | |||||| |||||
Sbjct 4844 AAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCTACATGAATATTAAAGGATTGA 4785
Query 152829 CTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGCCTTCATC 152888
|| ||||| |||||||| ||| || || ||||| | || || ||| | ||
Sbjct 4784 CTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATTGTGGACTTTACGGATATT 4725
Query 152889 TCCCAGGCGGTTTTGTACAAATTTTTAACGC----TATCCGGTATACCTTCAATGTTCTG 152944
||||| |||| || || | || |||| | | || || ||| ||||| ||
Sbjct 4724 TCCCAAACGGTCTTATATAG----TTCACGCACATTTTGAGGAATGTTTTCGATGTTTTG 4669
Query 152945 AATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTT 153004
|| ||||| ||| | || ||| || || ||| || |||||
Sbjct 4668 TATGGAGCCACGACTTGCGATTATTTGATTTTTCATATCATCATCCCACAAGTCCAGTTC 4609
Query 153005 AATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCT 153064
| || ||| | ||| | || || || || |||||||| || | || |||||||||
Sbjct 4608 GGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAGACAGCACTCGTCT 4549
Query 153065 CAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGT 153124
|| | || |||| | ||||| || ||||| ||||| || | ||| || || ||
Sbjct 4548 TGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGT 4489
Query 153125 GGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTC 153184
| ||| || ||||| || | | || |||||| |||| |||||| | || |
Sbjct 4488 CGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTT 4429
Query 153185 GTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244
||||| | | ||| ||||| || | ||| | |||||||| || |||||
Sbjct 4428 CTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATTCCACATATCATACTG 4369
Query 153245 TA--ACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG 153302
| | || ||| | || | ||||| || || | || || |||| || |
Sbjct 4368 GAGAATAC-CCTTG-CTAACTGGACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCA 4311
Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362
||||| || ||||| || || | ||||||||||| ||||||||| || |||| |||
Sbjct 4310 GCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTC 4251
Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422
|||| ||| | || ||||| || || |||| | | || || || || ||
Sbjct 4250 AGAAGACACGCCTTATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGT 4191
Query 153423 CCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCG 153477
|| || | || | || || || ||||| | |||| || |||||| ||
Sbjct 4190 CCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTTCTTAGCCTCGGGC--- 4134
Query 153478 CTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTA 153537
| || |||| |||| |||||| || ||||| | ||| || | || || |
Sbjct 4133 --AGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGA 4076
Query 153538 TCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGG 153597
| | || || ||| | || || || ||| | || || | |||| | ||| | |
Sbjct 4075 CCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTC--CGGTGT-TACGAACATATTGAGAG 4019
Query 153598 CAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGATCTC 153655
| || || |||| ||| || || || |||| || | || || | |||| || || ||
Sbjct 4018 CTATCGATGCCAAATTGCAAACAGCAATCTCATCTG-GT-GCAGAATACTCAACAATTTC 3961
Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715
| ||| | ||| |||||||| || ||||| |||||| || ||||| ||||| || ||
Sbjct 3960 AGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACA 3901
Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAA 153772
|| || |||||||||||||||||| ||| ||||| ||||| | || | ||| |||
Sbjct 3900 CGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAA 3841
Query 153773 CCTATGCAGGTCCTGCG-CTCG--CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCG 153829
|| | ||| || | || | || || | | | || ||||| ||||||||
Sbjct 3840 CCAA---AGGGATTGAGCCTTGATAACACGAT-TTGCT--CGACCCTCCTTCTCGTAT-- 3789
Query 153830 CTCGTACAG---TCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATG 153886
| ||| || || |||||||| || || | || ||||| || ||||||| ||
Sbjct 3788 TTTGTATAGAGCTC-CTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTG 3730
Query 153887 CGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCAC 153946
||| |||||||| ||||| || | ||| | ||||| ||| |||| ||| || |
Sbjct 3729 CGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTAT 3670
Query 153947 CCAGAGCGCGTA 153958
||| || || ||
Sbjct 3669 CCACAGGGCATA 3658
>seq2274
Length=37031
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | || || || | | |||||||||| || |||||||||||
Sbjct 30385 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 30326
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||| || || || || | |||| |||||||| || || |||||
Sbjct 30325 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 30266
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | ||| || | | |||||||
Sbjct 30265 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACC 30206
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || ||||||| || || || |||||||||||
Sbjct 30205 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159
>seq7704
Length=29863
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
||||||| || ||||||||||| ||| | ||| || || || | ||| || || |
Sbjct 18545 TTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCAG 18486
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537
| |||| | |||||| || || ||||| || ||||||||||| ||| | || | |||
Sbjct 18485 CAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC-CTGAATCTTGGCTTTG 18427
Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597
| | ||| | ||| || | || || ||||| | || | || ||||| || || |||
Sbjct 18426 ACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 18367
Query 138598 TTTACAAAAATCTGCAT 138614
|| || || ||||||||
Sbjct 18366 TTAACGAAGATCTGCAT 18350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495964226940240
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