Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq42801 179 4e-40 seq2144 150 2e-31 seq2274 89.7 5e-13 seq7704 87.8 2e-12 >seq42801 Length=1186 Score = 179 bits (198), Expect = 4e-40 Identities = 527/795 (66%), Gaps = 44/795 (6%) Strand=Plus/Plus Query 28418 GACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGACATCGATTGGGAGTTTCCGGGC 28477 || || |||| |||||||||||||||||||||||| || ||||| ||||| || |||||| Sbjct 14 GAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGAATTCCCGGGC 73 Query 28478 GGCAAAGGAGCCAATCCCGATGTCGGCAACGCCGAGCGCGACCGCGCCACCTACACTGC- 28536 |||||||| ||||| || || | |||| | | || ||| | | || || ||| Sbjct 74 GGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAG---GACGGGGAAACTTA-TGTGCT 129 Query 28537 CCTGCTGCACGAGCTGCGCATCCAACTGGA--CGCCCTCGGCGCTCGCACCGACCGCTAC 28594 ||| || | || ||||| ||||| || |||||| |||| |||| | Sbjct 130 GCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCG--GAAACCGGCCGCAAG 187 Query 28595 TATCCGCTGACGTCGGCCATCAGCGCGGGCAACGACAAGATCGCCGTGGTCGATTACGCC 28654 ||| |||||| || ||||||||||| ||||| |||||||||| | ||| | ||| | Sbjct 188 TATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGCATACAAC 247 Query 28655 GAAGCGCAAAAGTACCTCGA-----CACGATTTTTCTCATGACGTACGATTTCAAAGGCG 28709 | ||||| | ||||| ||| || || || |||| ||||| ||| | |||| Sbjct 248 GTCGCGCA----GATCTCGATGGTTCAC-ATCTTCCTGATGAGCTACGACTTCTACGGCG 302 Query 28710 -CGTGGAGC--AACACCGATCTGGGCCATCAGGCGGCACTGTTTGCGCCCGCGTGGCGTC 28766 | | || | || | | ||||| |||||| | || ||| |||||| || || | Sbjct 303 CCTTCGATCTGAAAA---ACCTGGGGCATCAGACCGCGCTGAATGCGCCGGCCGGGAAAC 359 Query 28767 CCGACGAACCGTATTGCGCCGACCGT----GCCGTCGAGGCGCTTCTCGACCAGAACGTT 28822 | ||| |||| | | || || || | ||| | ||||| || | ||| || | Sbjct 360 CGGAC--ACCG-CCTACACC-ACGGTGAACGGCGTGAATGCGCTGCTGGCGCAGGGCG-T 414 Query 28823 CCCGCC-GGCAAAATAGCCATCGGCGTCGCCATGTACGGTCGCGGCTGGACCGGGGTGAC 28881 | ||| ||||| || | | ||||| ||||||||| || ||||| ||||||||||||| Sbjct 415 CAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGACCGGGGTGAA 474 Query 28882 GGGCGACGACAAAAAC---CCATTCCTGGGCGTCGCTACCGGGCCCGTGCCCGGCACTTG 28938 ||| || | || ||| || ||| ||| ||| |||||||| || ||||| || Sbjct 475 CGGCTACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTCAAAGGCACCTG 534 Query 28939 GGAGGCGGGCGTCGTGGACTATCGACAGATCGTGCACAACCTCA------CCCAATACAA 28992 |||| ||| |||||||||| || ||||||| | | ||| | | | | Sbjct 535 GGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGCGGCGAGTGGCA 594 Query 28993 CTATTACTACGACGAAATGGCGAAAGGCGCGTACGTGTATAATCGCGAAAACGGCAACCT 29052 || |||||||| | |||| ||| | ||||||| || | | |||| | || Sbjct 595 GTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGTTCAAACCTACCACCGGCGATCT 654 Query 29053 AGTCACTTACGACAATCCGAAATCTGTAGCCGACAAGACCAAGTATGTGCTCGATCATGA 29112 |||| | ||| || | || | | ||| |||||| ||| | ||| | | Sbjct 655 GATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGTGTTGGATAAGCA 714 Query 29113 ACTGGCGGGCGTTTTCAGTTGGGAAATCGACGCCGACAACGGAGACCTTCTCAACGCCAT 29172 |||| ||| | ||| ||||| |||||||| |||||||| || |||||||| ||| Sbjct 715 GCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGATATTCTCAACAGCAT 774 Query 29173 CAACAAAGGCCTGGG 29187 ||| ||||||| Sbjct 775 GAACGCCAGCCTGGG 789 >seq2144 Length=13752 Score = 150 bits (166), Expect = 2e-31 Identities = 808/1272 (64%), Gaps = 47/1272 (4%) Strand=Plus/Minus Query 152709 GCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCGCCACGAGTAA 152768 || || ||||| ||||| | ||||||||| || ||||| || || ||| ||| | Sbjct 4904 GCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTAAGACCCGCTTTCCAGGAGAAG 4845 Query 152769 TTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGG 152828 ||||| || |||| | | | || | |||| || || | |||||| ||||| Sbjct 4844 AAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCTACATGAATATTAAAGGATTGA 4785 Query 152829 CTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGCCTTCATC 152888 || ||||| |||||||| ||| || || ||||| | || || ||| | || Sbjct 4784 CTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATTGTGGACTTTACGGATATT 4725 Query 152889 TCCCAGGCGGTTTTGTACAAATTTTTAACGC----TATCCGGTATACCTTCAATGTTCTG 152944 ||||| |||| || || | || |||| | | || || ||| ||||| || Sbjct 4724 TCCCAAACGGTCTTATATAG----TTCACGCACATTTTGAGGAATGTTTTCGATGTTTTG 4669 Query 152945 AATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGTACACGTTCAGTTT 153004 || ||||| ||| | || ||| || || ||| || ||||| Sbjct 4668 TATGGAGCCACGACTTGCGATTATTTGATTTTTCATATCATCATCCCACAAGTCCAGTTC 4609 Query 153005 AATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCT 153064 | || ||| | ||| | || || || || |||||||| || | || ||||||||| Sbjct 4608 GGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAGACAGCACTCGTCT 4549 Query 153065 CAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGT 153124 || | || |||| | ||||| || ||||| ||||| || | ||| || || || Sbjct 4548 TGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGGGCTGT 4489 Query 153125 GGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTC 153184 | ||| || ||||| || | | || |||||| |||| |||||| | || | Sbjct 4488 CGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTTATCTT 4429 Query 153185 GTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244 ||||| | | ||| ||||| || | ||| | |||||||| || ||||| Sbjct 4428 CTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATTCCACATATCATACTG 4369 Query 153245 TA--ACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG 153302 | | || ||| | || | ||||| || || | || || |||| || | Sbjct 4368 GAGAATAC-CCTTG-CTAACTGGACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCA 4311 Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 ||||| || ||||| || || | ||||||||||| ||||||||| || |||| ||| Sbjct 4310 GCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTC 4251 Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422 |||| ||| | || ||||| || || |||| | | || || || || || Sbjct 4250 AGAAGACACGCCTTATCACTCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGT 4191 Query 153423 CCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCG 153477 || || | || | || || || ||||| | |||| || |||||| || Sbjct 4190 CCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTTCTTAGCCTCGGGC--- 4134 Query 153478 CTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTA 153537 | || |||| |||| |||||| || ||||| | ||| || | || || | Sbjct 4133 --AGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGA 4076 Query 153538 TCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGG 153597 | | || || ||| | || || || ||| | || || | |||| | ||| | | Sbjct 4075 CCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTC--CGGTGT-TACGAACATATTGAGAG 4019 Query 153598 CAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGATCTC 153655 | || || |||| ||| || || || |||| || | || || | |||| || || || Sbjct 4018 CTATCGATGCCAAATTGCAAACAGCAATCTCATCTG-GT-GCAGAATACTCAACAATTTC 3961 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| | ||| |||||||| || ||||| |||||| || ||||| ||||| || || Sbjct 3960 AGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACA 3901 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAA 153772 || || |||||||||||||||||| ||| ||||| ||||| | || | ||| ||| Sbjct 3900 CGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAA 3841 Query 153773 CCTATGCAGGTCCTGCG-CTCG--CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCG 153829 || | ||| || | || | || || | | | || ||||| |||||||| Sbjct 3840 CCAA---AGGGATTGAGCCTTGATAACACGAT-TTGCT--CGACCCTCCTTCTCGTAT-- 3789 Query 153830 CTCGTACAG---TCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATG 153886 | ||| || || |||||||| || || | || ||||| || ||||||| || Sbjct 3788 TTTGTATAGAGCTC-CTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTG 3730 Query 153887 CGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCAC 153946 ||| |||||||| ||||| || | ||| | ||||| ||| |||| ||| || | Sbjct 3729 CGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTAT 3670 Query 153947 CCAGAGCGCGTA 153958 ||| || || || Sbjct 3669 CCACAGGGCATA 3658 >seq2274 Length=37031 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | |||||||||| || ||||||||||| Sbjct 30385 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 30326 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| || || || || | |||| |||||||| || || ||||| Sbjct 30325 AGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 30266 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | ||| || | | ||||||| Sbjct 30265 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACC 30206 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| || || || ||||||||||| Sbjct 30205 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159 >seq7704 Length=29863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||| || ||||||||||| ||| | ||| || || || | ||| || || | Sbjct 18545 TTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCAG 18486 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 | |||| | |||||| || || ||||| || ||||||||||| ||| | || | ||| Sbjct 18485 CAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC-CTGAATCTTGGCTTTG 18427 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | ||| | ||| || | || || ||||| | || | || ||||| || || ||| Sbjct 18426 ACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 18367 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 18366 TTAACGAAGATCTGCAT 18350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495964226940240