Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq36881 82.4 3e-11 >seq36881 Length=946 Score = 82.4 bits (90), Expect = 3e-11 Identities = 174/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 60963 CGCAATCCCGCCAGCCTGACAAAGCTGATGACGGGCTATGTCGTGGATC--GCGCTATCG 61020 ||| |||| ||||||||||| || ||||||| |||| ||| | | | ||||| | Sbjct 653 CGCGATCCGGCCAGCCTGACCAAAATGATGACCAGCTACGTCATCGGCCAGGCGCT---G 709 Query 61021 ATAGTCATCGCATTACGCCA-GACGATATTGTCACCGTGGGGCGCGATGCGTGGGCGAAA 61079 | || | | | |||| |||||| | || ||||| || | || || ||||||| Sbjct 710 AAAGCGGGCAAAATCGGCCAGGACGATCTGGTGACCGTCGGCCAGGACGCCTGGGCGACC 769 Query 61080 GATAATCCAGTGTTTGTCGGTTCTTCACTGATGTTTTTGAAAGAGGGCGATCGCGTATCG 61139 | || || ||||| || || || |||||||| |||| || || | || || Sbjct 770 GGCAACCCGGTGTTCAAAGGCTCCTCGCTGATGTTCCTGAAGCCTGGTGACAGGGTCACG 829 Query 61140 GTACGTGATTTAAGCCGTGGTTTAATTGTGGATTCCGGAAATGACGCTTGTGTTGCACTG 61199 ||||| ||| | ||||| || | || | |||||||| || ||||| || || || || Sbjct 830 GTACGCGATCTCAGCCGCGGCATCATCATCGATTCCGGCAACGACGCCTGCGTGGCGATG 889 Query 61200 GCTGACTATATTGCCGG 61216 || |||||| | || || Sbjct 890 GCGGACTATGTGGCGGG 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198635355054486