Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 161 9e-35
seq42801 132 4e-26
>seq2144
Length=13752
Score = 161 bits (178), Expect = 9e-35
Identities = 1168/1863 (63%), Gaps = 62/1863 (3%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAA--AACGGATATTTGaaaaaaaTCGAGGAAA 122898
|| || |||||||||| ||| || || || | || |||||| ||||||| | | |
Sbjct 3097 TATAATTATTTTGGATTCAAGACTTTGGAGCGATCG--TATTTGTTAAAAATCAATGGCA 3154
Query 122899 AGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCG 122958
| || || |||||| || || ||||| ||||| || || || || | || ||| |
Sbjct 3155 AAGTTGCTGAACGTCCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATG 3214
Query 122959 ACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGA 123018
| || || ||| || |||||| ||||| | || || || ||||| || ||
Sbjct 3215 ATATTGATTCCGCACTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCT 3274
Query 123019 GTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCA 123078
|| || | ||||| || | || | |||||| ||||||| || ||| | ||||
Sbjct 3275 CACCAACACTTTTCGCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCA 3334
Query 123079 CCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTT 123138
|| || ||| ||| || |||| | || || || | || ||| |||| |
Sbjct 3335 CCATGGTATCTGACTCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCT 3394
Query 123139 CCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC- 123197
| || | | || || || || |||| ||||| | | | |||| || | | |
Sbjct 3395 CAAAGTCAGCAGGTGGTATTGGTCTGAATGTGCATTGCATTCG-GGCCAAGGGAACTTCG 3453
Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCG--GGCTCGAATCC-ATGCTGCGAGTTTACAAT 123254
|| || ||||| | || | | ||| |||| | ||| |||||| |||| | ||
Sbjct 3454 ATTAGTGGCACCAATGGTA---CATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAAC 3510
Query 123255 AACGCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCAAAGGCGCGATGGCGATCTAT 123311
|| | | || | || || ||||| ||||||| | || || | || || ||
Sbjct 3511 AATGTGGCACGTTATGTGGATCAGGGTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTAC 3570
Query 123312 CTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAAT-TTAAAACGCAACATGGGGGC 123370
|| || || ||||| ||||| | || || || || |||| | | |||| ||
Sbjct 3571 CTCGAGCCTTGGCATTCCGATGTCTTTGAGTTCTTGGATCTTAAGAAG-AACACTGGCAA 3629
Query 123371 GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCG 123430
|| ||| | || || ||| |||| || || | ||| |||| ||||||||||||
Sbjct 3630 AGAGGAACATCGTGCTCGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAA 3689
Query 123431 ACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAG 123490
||||| ||| | | | | ||||| || ||||| || | |||||| || |
Sbjct 3690 GCGCGTGGAAGCCAATGAGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGC 3749
Query 123491 CGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG-----C 123545
|| |||| || || ||||||| ||| | || | |||||||| || || |
Sbjct 3750 TGATGTTTGGGGTGATAAGTTTGAGGAGCTCTATACAAAATACGAGAAGGAGGGTCGAGC 3809
Query 123546 AAACAG-GTTAGTCAGGTTCCGGCACGT-GATTTGTTCAAATTTATTATCGAAACACAAG 123603
||| | |||| ||| || | | | | |||| || || || ||||||
Sbjct 3810 AAATCGTGTTATCAAGGCTCAATCCCTTTGGTTTGCC-------ATCATTGAGTCACAAG 3862
Query 123604 TCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGA 123663
| || || || || ||||||||||||| ||| || | || ||| | || | ||| ||
Sbjct 3863 TGGAGACTGGCACACCGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAAC 3922
Query 123664 GCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATG 123723
|| |||| ||||| ||||| ||||| | ||| | |||||| | || || |
Sbjct 3923 AAAATGTGGGCACAATTAAATGCAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCAC 3982
Query 123724 CCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGT-----CGA 123778
| ||| | | || || || |||||||| ||||| | ||| | ||| ||
Sbjct 3983 CAGATGAGATTGCTGTTTGCAATTTGGCATCGATAGCTCTCAATATGTTCGTAACACCGG 4042
Query 123779 AAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTT 123838
| | | || | | ||| || ||||||| | || || | ||| || || ||
Sbjct 4043 AGAAGACG-TACGACTTTGTGAA-GCTCAAAGAGGTCACCAAGATTGTTACCAAAAACTT 4100
Query 123839 GAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAA 123898
|||||| || |||||| | |||| || ||| || || || || || || |
Sbjct 4101 GAACAAGATCATCGATATCAATTACTACCCTCTGCCCGAGGCTAAGAAATCCAACTTAAG 4160
Query 123899 ACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTT---TGTAATGCTGCG 123955
||| | || | ||| | || ||||||| | || || || || | |||||| |
Sbjct 4161 ACATCGTCCAATTGGAATTGGAGTTCAAGGACTTGCAGATGCTTTGATTTTAATGCGGT- 4219
Query 123956 CATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTA 124015
|| || || || || || | || | || ||| || ||| |||||| |||||
Sbjct 4220 -ATCCC-TATGAGAGTGATAAGGCGTGTCTTCTGAATCAACAGATATTCGAAACCATTTA 4277
Query 124016 TTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTA 124075
|| ||||| ||||| || ||||| || || || | | | ||| |||| || | ||
Sbjct 4278 CTATGGCGCATTGGAAGCCAGCTGTGAGCTGGCTGAGAAAGATGGCACGTATGAGACCTA 4337
Query 124076 CGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGAC 124135
| ||| || || | ||| |||||| | ||||| || ||||||||| ||| ||
Sbjct 4338 TGAGGGAAGTCCAGTTAGCAAGGGTATTCTCCAGTATGATATGTGGAATAAGGTACCCAC 4397
Query 124136 AAATTTGTGGGACTGGAGCGTTTTAAAACAACGC----ATATCGACGCACGGTTTGCGTA 124191
|||| | ||||||||| ||| || ||| | ||| | |||||| ||||||
Sbjct 4398 AAATCTCTGGGACTGG-GCGA---AACTCAAGGAGAAGATAAGCAAGCACGGAGTGCGTA 4453
Query 124192 ACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACG 124251
| || ||| | | || ||||| |||||| | || || || || | || || || |
Sbjct 4454 ATTCTCTGCTTATCGCACCAATGCCAACGGCATCGACAGCCCAGATAATGGGTAATAATG 4513
Query 124252 AATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTC 124311
|||| ||||| || | |||| || | ||| |||||||| | | || || ||||
Sbjct 4514 AATCTTTCGAACCCTACACTTCAAACATCTACACAAGACGAGTGCTGTCTGGAGAGTTTC 4573
Query 124312 AAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAACA 124371
| || | |||||||||||| || || | | | | |||| ||||| | |
Sbjct 4574 AGGTTGTGAATCATCATTTGTTGCGTGATCTAACCGAACTGGACTTGTGGGATGATGATA 4633
Query 124372 TGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAAC 124431
|| || |||| || || ||||| | | || ||||| ||||| ||
Sbjct 4634 TGAAAAATCAAATAATCGCAAGTCGTGGCTCCATACAAAACATCGAAAACATTCCTCAAA 4693
Query 124432 ACGTCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAA 124487
| || |||| || || ||||| |||||||| | ||| | || ||| ||
Sbjct 4694 ATGTGCGTGAACTATATAAGACCGTTTGGGAAATATCCGTAAAGTCCAC----AATCAAA 4749
Query 124488 ATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCG 124547
||||| | || || || || | || |||||||||||||| ||||| | ||||||
Sbjct 4750 ATGGCAGCAGATCGTGGAGCTTTCATTGATCAAAGTCAATCCTTTAATATTCATGTAGCT 4809
Query 124548 GAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGC-GGACTCAA 124606
||||| | || | |||| ||| || | | | |||| ||| || || ||
Sbjct 4810 GAACCAAATTATGGTAAGCTGACATCCATTCATTTCTTCTCCTGGA-AAGCGGGTCTTAA 4868
Query 124607 AACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGA 124666
||| || |||||||| | | || || ||||| ||| |||| ||||| ||||| || ||
Sbjct 4869 AACAGGAATGTATTATCTTCGCACTAAGCCGGCAGCCAATGCTATTCAGTTTACTGTAGA 4928
Query 124667 CAA 124669
||
Sbjct 4929 TAA 4931
>seq42801
Length=1186
Score = 132 bits (146), Expect = 4e-26
Identities = 364/550 (66%), Gaps = 11/550 (2%)
Strand=Plus/Minus
Query 50156 GTAATCAACTACGCCGTCTTCCCAAGTGCCTGCCGCCGGGCCGGTGGCGATTCCCGTAAA 50215
||| || || | ||||| ||||| |||||| |||| ||||||||| | || || ||
Sbjct 556 GTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTGCCGGTGAA 497
Query 50216 CGGATTGTCGTCTTTGTAGCCGGTCACGCCGCGCCAACCCCTGCCGTACATGGCCACGCC 50275
|||| ||| || | ||||||| |||| ||| |||||| | ||| |||||||| |||
Sbjct 496 CGGAATGTTGTTCTGGTAGCCGTTCACCCCGGTCCAACCGCGGCCATACATGGCGGTGCC 437
Query 50276 TACGATTATTTTGCTCGGCTGCACGTTTTGATCGAGAAGAACGTTTACCGCAAAATCGGT 50335
|||| || |||| ||||| ||| || | || || | || || | | ||
Sbjct 436 GACGACGATCTTGCCCGGCTTGACGCCCTGCGCCAGCAGCGCATTCACGCCGTTCACCGT 377
Query 50336 CGTGTACTTTTCGTCGGTGTTCCATGCGGGCGCATACAAAGGCGTCTGATGTCCCAAATC 50395
||||| ||| | |||| || ||||||| || | |||||||| |||| |
Sbjct 376 GGTGTAGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGATGCCCCAGGTT 317
Query 50396 GAC--GGTGGACCAAGCGCCTTTAAAATCGTAACTCATTAAAAATATTTTATCTAAATAA 50453
| | || | ||||| | || ||||| ||||| | || || | | | | |
Sbjct 316 TTTCAGATCGA--AGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATCGAG 259
Query 50454 TTTTGAGCGTCGCCGTAATTGACAAGGGCGATTTTATCGTAACCTGCGCTAACGGCGCTC 50513
| || ||| || ||| || | |||| || || | || ||||| | ||||
Sbjct 258 ATCTGCGCGACGTTGTATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATGGCGGAG 199
Query 50514 GTCAATTCGAATTCGCGGCCGGTGACGCGTTGA-AGATCGTCCAGCATGTCGCGCAGATC 50572
|||| || | | ||||||||| | || || || | |||||||| | ||||| ||
Sbjct 198 GTCAGCTCATACTTGCGGCCGGTTTC-CGCCGACAGCTGATCCAGCATCGCCCGCAGTTC 140
Query 50573 GCGAAGCAGCACAACGTACGTGAGTCCGTCTTTGTGAGGATCGCCGAC-TGCGGGATTGG 50631
| ||||| || || || ||||| | |||| ||| | | |||| ||||
Sbjct 139 TTTCATCAGCAGCACATAAGTTTCCCCGTCCT---GAGGGCTGCCCAGATTCGGG-TTGG 84
Query 50632 CGCCGTTGCCGCCGGGAAACTCCCAATCGATGTCGACGCCGTCGAAAAACTTCCAAGTCA 50691
|||| |||||||| || || ||||| ||||| || ||||||||||| |||||||| |||
Sbjct 83 CGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAGGTCT 24
Query 50692 GCAGAAACTC 50701
|||| |||||
Sbjct 23 GCAGGAACTC 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451731619527320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |