Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq260 138 1e-27
seq19922 113 6e-20
>seq260
Length=58366
Score = 138 bits (152), Expect = 1e-27
Identities = 291/426 (68%), Gaps = 10/426 (2%)
Strand=Plus/Minus
Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805
|||| || || |||||||||| || ||||| | |||||| |||| | || |||||
Sbjct 6888 AACCCGTACCGATACCTTCGGCTCCATTCACCAAAACCATCGGAATAATCGGAATATACC 6829
Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865
| | |||||||| | |||||||| | ||| | | || || |||||| ||
Sbjct 6828 ATACAGGTTCAATTTTCTGACCATCATCCACTTGATATTGCAACAAAGGATCATCCAACG 6769
Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTT--TTGTGAAGATGTACCTCGT--TTGA 175921
||| | |||| || | | ||| || | ||||||| || || | | |||
Sbjct 6768 GATGATAGATGAGTCGGG--TTAATGGCGACATCATTGTGAAAATATAACGAGCACTTGC 6711
Query 175922 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
|| ||| |||||||| ||||||| || || |||||||||| || || || | |||
Sbjct 6710 -ACA-ATCCTTGCCACCGGTGAGACGAGTACCGAATTGACCACGGGGTTCCAGCAAATTA 6653
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGAC 176040
|||||||| || || | ||||| | ||||| || ||||| || ||| || || || ||
Sbjct 6652 ATATTGTTAGATCCGACATAGTTCTGAGCCAAGTTTACAATTGTCATCTGC-AGAGAAAC 6594
Query 176041 TTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCAT 176100
||| ||||||||||| |||||| | || ||||| | | | ||| || ||||| || |
Sbjct 6593 TTCGCCGTGATGGTATGCCGACATCTCGGCCACGGAACCAGACAATTGAGCCACTTTGAC 6534
Query 176101 CTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAG 176160
||| ||| ||| | || |||| | |||||||||| ||||| |||||| ||
Sbjct 6533 CTCGCGTTTGTCGTTACGCTTAAAACACGTAAACATGACCTTCCTCTGACCAGGCTTTAG 6474
Query 176161 GCCGTC 176166
|| ||
Sbjct 6473 ACCATC 6468
>seq19922
Length=1369
Score = 113 bits (124), Expect = 6e-20
Identities = 125/164 (76%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 127516 CACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 127575
||||||||| || || || |||||||| |||||||| || |||||||||||| ||
Sbjct 1218 CACAGCAAAATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAG 1159
Query 127576 ACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGA 127634
||| ||||| ||||| |||||||||| |||||| |||| | ||||| ||| |||||
Sbjct 1158 ACCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAA-CTGCCGCTGAAGA 1100
Query 127635 AGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678
|||| || || ||| || || |||| | |||||| |||||
Sbjct 1099 AGATGCCTTCGACAGCAGCAAAGGCAATGATGCGCTCGCCAAAG 1056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613138581867720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |