Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 125 2e-23
seq7704 118 2e-21
seq355 114 3e-20
>seq2274
Length=37031
Score = 125 bits (138), Expect = 2e-23
Identities = 159/218 (73%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || |||||||| |||| ||||||||||| | ||| | |||||
Sbjct 30370 AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCC 30311
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || |||||||| ||||||||||| || ||| ||| || || |||
Sbjct 30310 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 30251
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || || | ||| || | || || || ||||| ||||| |||
Sbjct 30250 TGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTC 30191
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || | || || || ||||| || ||||||
Sbjct 30190 TTGCCAGTCAAGGTCTTGACGAAAATCTG---CATTTT 30156
>seq7704
Length=29863
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| | || ||||| || || | |||||| || | | |||
Sbjct 18570 CGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTG 18511
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||||| ||||| || || ||||| | ||||||||| || ||| |||||||
Sbjct 18510 CGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCT 18451
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||||||||| || || ||||| ||| || | | ||| || || |
Sbjct 18450 TCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGA 18391
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||||||||||||| ||||| || || || ||
Sbjct 18390 GTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTG 18353
>seq355
Length=9390
Score = 114 bits (126), Expect = 3e-20
Identities = 142/194 (73%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501
|| |||| ||||||||| | || ||| | ||||| |||||||||||||||||||| |||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCG 199561
||||||||||| || || || || || || || || || |||||| ||
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271
Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621
| |||||| | | ||| || ||||| ||||| ||||| || || | |||||||||||
Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211
Query 199622 ATTTGGTACATTTT 199635
|| || ||||||
Sbjct 9210 ATCTG---CATTTT 9200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178195551185489
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |