Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq19922 284 1e-71
seq42801 228 8e-55
seq2274 113 5e-20
seq355 96.9 3e-15
>seq19922
Length=1369
Score = 284 bits (314), Expect = 1e-71
Identities = 410/574 (71%), Gaps = 6/574 (1%)
Strand=Plus/Minus
Query 132862 CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA-AGCAAAGTCGCAATGCAAGCCCTC 132920
|| || || || ||||| |||| |||||| ||||| |||||| |||||||| | |||||
Sbjct 1250 CTGGGACGCTGTACCAAGTGCTGGAACAT-AAGCACAGCAAAATCGCAATGAAGTCCCTC 1192
Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980
||| | ||| || || || || ||| || | |||||||| || || || || || ||
Sbjct 1191 GTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCACGCTTCTTCAG 1132
Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040
||| || || | || |||||||| ||||||| ||| ||||| || || || || |
Sbjct 1131 CCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATGCCTTCGACAGCAGCAAAGGCAAT 1072
Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| ||||||||| || | || | || || |||||| ||| ||||| || |||||
Sbjct 1071 GATGCGCTCGCCAAAGTTTGCCGCCTTCGAGGAGATCCAAGACAGAGCCCAATCTGCCTT 1012
Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160
|| || ||||||||||| ||||| || || | | ||| | || | |||
Sbjct 1011 ACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAGAG--GTAGTCGCGCTGATGCGGA 954
Query 133161 ACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCG 133218
| | | ||| ||||||||||| |||||||||||||| || |||||||||||
Sbjct 953 TCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCCGAGTGGACATTCTCCATGGCA 894
Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278
|| || ||||| |||||||| || ||||| | |||||||| || ||| ||||||
Sbjct 893 ATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTGCACTTCCTGGCTGAAGCGCTCG 834
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
|| ||||| || || || |||||||| |||||| || || |||| || || |||
Sbjct 833 ACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAAGAAAGCCAAAACATGTGAAATG 774
Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398
|| || ||||| ||||| | | || |||||||| | |||||||||| || |||||
Sbjct 773 AAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGTCATGTCCTTGGATAGATCCACT 714
Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGCTTTTT 133432
||||| |||||||| || || || ||||| ||||
Sbjct 713 TCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
>seq42801
Length=1186
Score = 228 bits (252), Expect = 8e-55
Identities = 519/783 (66%), Gaps = 15/783 (2%)
Strand=Plus/Minus
Query 61512 CAGACCGGCGTGCATGGCGTTCAGCAGGTCGCCGTTGTCGGCGTCGATCTCCCACGCGAA 61571
||| | ||||| |||| ||| || | ||||||||||| |||||||||||||| | |||
Sbjct 787 CAGGCTGGCGTTCATGCTGTTGAGAATATCGCCGTTGTCCGCGTCGATCTCCCAGGAGAA 728
Query 61572 CAGACCGCCCAGCCCGAGCTCGCGCGCGTACTTTCCCTTGTCGAGTATCGAATCTGCGTT 61631
|| ||||||||| || | ||||||| || ||| | | ||| || |
Sbjct 727 TAGGCCGCCCAGCTGCTTATCCAACACGTACTTGCCTTTGGCCTGCCCCGAGCGGGCATC 668
Query 61632 GTCGAAGGACACCAGCGCGCCCGCCGGCTCGTCGAAGGCGTACGCGCCTTTGGCCGTCGA 61691
||| |||| | ||| |||| | | | ||| |||| | ||| ||||| |
Sbjct 667 GTCAAAGGTGATCAGATCGCCGGTGGTAGGTTTGAACACGTAAGGCGCTTCCGCCGTGGC 608
Query 61692 GTCGTACGCGTA-TGCGTATCGGCCGCCGTCGA--TGGCTAAGCGCAACTCGCGGTAGTC 61748
|||||| | ||| ||| ||| |||| || ||||| ||| | || |||||||||
Sbjct 607 GTCGTAGGTGTACTGCCACTCG-CCGCTCATGAACTGGCTG-GCG-ATCTGGCGGTAGTC 551
Query 61749 CACCACGCCGTCCTCCCACGTGCCCGGCACNNNNNNNNNNNNNNNNNNNNNGAACGGGTT 61808
||| | ||||| |||||| ||||| || |||||| |
Sbjct 550 CACGATGCCGTTCTCCCAGGTGCCTTTGACCGGCCCGGTGGCGGTGCCGGTGAACGGAAT 491
Query 61809 GCCGTCCGCGTAGCCGGTCACGCCGGTCCAGCCGCGTCCGTACATGGCCACGCCGAGCAC 61868
| || | ||||||| |||| |||||||| ||||| || |||||||| ||||| ||
Sbjct 490 GTTGTTCTGGTAGCCGTTCACCCCGGTCCAACCGCGGCCATACATGGCGGTGCCGACGAC 431
Query 61869 GATCTTGTC-GGCGGGCACGCCCTGCGCTAACAGCTGACGCACCGCGTTGTCGGCGGTGT 61927
||||||| | ||| | ||||||||||| | |||| | ||| |||| | | |||||
Sbjct 430 GATCTTGCCCGGCTTG-ACGCCCTGCGCCAGCAGCGCATTCACGCCGTTCACCGTGGTGT 372
Query 61928 AGGGCTCGTCGGGCCGCCACGACGGCGCGTACAGCGCGGTCTGGTGGCCCAGCTCGGT-- 61985
||| ||| || || | |||||| | |||||||||||| || ||||| | |
Sbjct 371 AGGCGGTGTCCGGTTTCCCGGCCGGCGCATTCAGCGCGGTCTGATGCCCCAGGTTTTTCA 312
Query 61986 GGTGGACCACGCGCCCTTAAAGTCGTAGCTCATCaaaaaaaTGCGGTCGAGCGAGCGGTG 62045
| | || | ||||| | |||||||||||||||| || ||| | | | |||| ||
Sbjct 311 GATCGA--AGGCGCCGTAGAAGTCGTAGCTCATCAGGAAGATGTGAACCATCGAGATCTG 254
Query 62046 CGCGCGCCCGTAGTCCACGACGGCGATCTTGTCGTCGCCGGCGCCGATGGCGCTGGTCAG 62105
|||| ||| |||| | |||||||||| | |||||||| ||||||| ||||||
Sbjct 253 CGCGACGTTGTATGCCACCTTGTCGATCTTGTCCTTGCCGGCGCTGATGGCGGAGGTCAG 194
Query 62106 CTCGTACGTCCTGTTGGTCTCGGTCTGCAGCTCGTCGAGCATGAGCNNNNNNNNNNNNNN 62165
||| ||| | | | ||| || | | ||||| || ||||| |
Sbjct 193 CTCATACTTGCGGCCGGTTTCCGCCGACAGCTGATCCAGCATCGCCCGCAGTTCTTTCAT 134
Query 62166 NNNNNNCGCGTACGTTTCGCGGTCGCGCTCCGCGTCGCCCAGCAGCGGGTTGGCGCCCTT 62225
| | || ||||| | ||| || | | |||||| |||||||||||| ||
Sbjct 133 CAGCAGCACATAAGTTTCCCCGTC---CTGAGGGCTGCCCAGATTCGGGTTGGCGCCTTT 77
Query 62226 GCCGCCCGGAAACTCCCAGTCCACGTCCAGGCCGTCGAACAGCTTCCACGTCTGCAGAAA 62285
||||||||| || |||||||| | |||| ||||||||| | |||||| |||||||| ||
Sbjct 76 GCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAGGTCTGCAGGAA 17
Query 62286 CTC 62288
|||
Sbjct 16 CTC 14
>seq2274
Length=37031
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || | || ||||| ||||||||| | || || ||| |
Sbjct 30156 AAAATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCA 30215
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | | | | | || | || |||| ||||| ||||| ||||| | ||
Sbjct 30216 TCTGATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCAGAT 30275
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||
Sbjct 30276 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACTCTTTCTGACTAC 30335
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||||| | || || || |||||||| ||| || | || ||
Sbjct 30336 AACATCCAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 30385
>seq355
Length=9390
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || || || ||||| | || ||||| |||||||| | || || || |
Sbjct 9200 AAAATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCT 9259
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | | | || | ||||||| ||||| ||||| || ||| | ||
Sbjct 9260 TCCGACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCAGAT 9319
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| ||||||| ||| || || |||||||| || | || || || ||||||
Sbjct 9320 CAGCAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGATGGCCGTACTCTGTCGGACTAC 9379
Query 38421 AACATCCAAAA 38431
|||||||| ||
Sbjct 9380 AACATCCAGAA 9390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499872277425280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |