Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2144 179 5e-40 seq19922 86.0 8e-12 >seq2144 Length=13752 Score = 179 bits (198), Expect = 5e-40 Identities = 1113/1755 (63%), Gaps = 54/1755 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| | ||||| || || |||||||| ||||| || ||||||||||| | Sbjct 3169 CCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGATTCCGCA 3228 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 ||||||| ||| | | | || | | |||| || || ||||||| || ||| Sbjct 3229 CTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAACACTTTTC 3288 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG--- 111788 |||| || || | || || |||| || || || | | || || Sbjct 3289 GCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCAC---CATGGTATCT 3345 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || |||||| | || || | || | | ||||| |||||||||| || Sbjct 3346 GACTCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTCAGCA 3405 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAAC--AAGTCTCGTATTAGAGGTA 111906 |||||||| || || | | ||| | | ||||| || | ||| ||||| || | Sbjct 3406 GGTGGTATTGGTCTGAATGTGCATTGCATTCGGGCCAAGGGAACT-TCG-ATTAGTGGCA 3463 Query 111907 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 | |||||| ||| |||| | |||| ||||| | ||||||||| || || | Sbjct 3464 CCAATGGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTT 3523 Query 111967 ATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGG 112022 |||| | || | ||| || | ||| ||| || | || | || || ||||| ||| Sbjct 3524 ATGTGGATCAGGGTGG-CGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGG 3582 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 || | ||| || | |||||| | || | ||| || | ||||| || Sbjct 3583 CATTCCGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGAACATCG- 3641 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| || ||||| |||| || || ||||| |||||| | || |||||| | || || | Sbjct 3642 TGCTCGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGC 3701 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | || ||||||| || | || || ||||| || || ||| | |||| ||| Sbjct 3702 CAATGAGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGG 3761 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| ||||||| | ||||| ||||| |||||| | || |||| || | | || | | Sbjct 3762 TGATAAGTTTGAGGAGCTCTATACAAAATACGAGAAGGAGGGTCGAGCAAAT-CGT-GTT 3819 Query 112262 GCCA--GCTGCCGATG--TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 || ||| | || | ||| || || | |||| ||| |||||||| |||| Sbjct 3820 ATCAAGGCT--CAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACAC 3877 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | || ||||| | ||| || | ||||||| ||||| || ||| | ||| |||| | Sbjct 3878 CGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACAA 3937 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 | || | ||| | || || ||||| | || | | | | |||||||| |||| Sbjct 3938 TTAAATGCAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGATTGCTG 3997 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTG 112497 | || || | ||||| || |||||| | || || || |||| |||| | | Sbjct 3998 TTTGCAATTTGGCATCGATAGCTCTCAATATGTTCGTAACACCGGAGA---AGACGTACG 4054 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 | | || || ||| | || || || || | ||| || |||||| | |||| | || | Sbjct 4055 ACTTTGTGAAGCTCAAAGAGGTCACCAAGATTGTTACCAAAAACTTGAACAAGATCATCG 4114 Query 112558 ATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 ||| |||| ||||| | ||| ||| ||||| || | ||||| ||||||| Sbjct 4115 ATATCAATTACTACCCTCTGCCCGAG---GCTAAGAAATCCAACTTAAGACATCGTCCAA 4171 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 112674 |||| | || || ||||| || || |||| || ||| | || | | | ||| Sbjct 4172 TTGGAATTGGAGTTCAAGGACTTGCAGATGCTTTGATTTTAATGCGGTATCCCTATGAGA 4231 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 || | ||| | ||| | ||||| || || || || | | ||| | | Sbjct 4232 GTGATAAGGCGTGTCTTCTGAATCAACAGATATTCGAAACCATTTACTATGGCGCATTGG 4291 Query 112735 AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 | || || | ||| |||| ||| ||||| | ||||| |||| |||||| ||||| Sbjct 4292 AAGCCAGCTGTGAGCTGGCTGAGAAAGATGGCACGTATGAGACCTATGAGGGAAGTCCAG 4351 Query 112795 CTTCACAAGGGG-TGCTTCAATTTGATATGTGGGA--AGGTGAGACCAAGCTTCACTACG 112851 || |||||| | || || | |||||||||| | |||| ||| || || | Sbjct 4352 -TTAGCAAGGGTATTCTCCAGTATGATATGTGGAATAAGGTACCCACAAA--TCTCTGGG 4408 Query 112852 ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 112911 |||||| |||||||| || | || | || | ||||| ||| | || | Sbjct 4409 ACTGGGCGAAACTCAAGGAGAAGATAAGCAAGCACGGAGTGCGTAATTCTCTGCTTATCG 4468 Query 112912 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 112971 ||||||||||||| || || || || || || ||||||||||||||| || ||||||| Sbjct 4469 CACCAATGCCAACGGCATCGACAGCCCAGATAATGGGTAATAATGAATCTTTCGAACCCT 4528 Query 112972 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 113031 |||| | |||||||| ||| || || | ||||||||| | |||| || | | Sbjct 4529 ACACTTCAAACATCTACACAAGACGAGTGCTGTCTGGAGAGTTTCAGGTTGTGAATCATC 4588 Query 113032 ATCTCGTGGATGACCTCAAAGAGATTGGTC-TCTGGTCCAAGGATATGAAGGATCTCATG 113090 || | || ||| || | || | ||| | | ||| | |||||||| ||| || Sbjct 4589 ATTTGTTGCGTGATCTAACCGA-ACTGGACTTGTGGGATGATGATATGAAAAATCAAATA 4647 Query 113091 GT-GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAAT-TAAG-AAG 113147 | | ||| |||| ||||| ||||| || | | ||||| | |||| | | | Sbjct 4648 ATCGCAAG-TCGTGGCTCCATACAAAACATCGAAAACATTCCTCA--AAATGTGCGTGAA 4704 Query 113148 TTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGT 113207 | || || ||||||||||| | ||| || | ||||| ||||||||| Sbjct 4705 CTATATAAGACCGTTTGGGAAATATCCGTAAAGTCCACAATCAAAATGGCAGCAGATCGT 4764 Query 113208 GGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA---AAGTCCAACGATG 113264 || |||||||||||||||||| | || |||||||| | | | || ||| Sbjct 4765 GGAGCTTTCATTGATCAAAGTCAATCCTTTAA--TATTCATGTAGCTGAACCAAATTATG 4822 Query 113265 TCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTAT 113324 ||||| | || || || | | | ||||| |||||| ||||| || |||||| Sbjct 4823 -GTAAGCTGACATCCATTCATTTCTTCTCCTGGAAAGCGGGTCTTAAAACAGGAATGTAT 4881 Query 113325 TACCTCCGATCTAAG 113339 || || || ||||| Sbjct 4882 TATCTTCGCACTAAG 4896 >seq19922 Length=1369 Score = 86.0 bits (94), Expect = 8e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 ||||| ||||| || | || ||||| ||| || || ||||||||| || || Sbjct 1056 CTTTGGCGAGCGCATCATTGCCTTTGCTGCTGTCGAAGGCATCTTCTTCAGCGGCAGTTT 1115 Query 102233 CTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 |||| | || | ||||| |||||||| ||||| ||||| ||||| |||||| || | Sbjct 1116 -TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTTATGCCCGGTCTTACCTTCTCGAATG 1174 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335 |||| ||||| || ||||||||||| || || ||||| ||| Sbjct 1175 AGCTGATCTCCCGCGACGAGGGACTTCATTGCGATTTTGCTGTG 1218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620369434688240