Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq260 86.0 7e-12
seq3773 82.4 9e-11
>seq260
Length=58366
Score = 86.0 bits (94), Expect = 7e-12
Identities = 165/241 (68%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597
|||||||||||| |||| || ||||| |||||||||| || || || | ||| || ||
Sbjct 6707 ATCCTTGCCACCGGTGAGACGAGTACCGAATTGACCACGGGGTTCCAGCAAATTAATATT 6648
Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTT-TCAGCGAGGGAAACTTCGC 167656
|| || || ||| | | ||||| || || || || || || || ||||||||||
Sbjct 6647 GTTAGATCCGACATAGTTCTGAGCCAAGTTTACAATTGTCATCTGC-AGAGAAACTTCGC 6589
Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCAT 167716
|||| ||||| || | | || ||||| | | | ||| || || || || | |||
Sbjct 6588 CGTGATGGTATGCCGACATCTCGGCCACGGAACCAGACAATTGAGCCACTTTGACCTCGC 6529
Query 167717 CTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCAT 167776
|||| || | ||||| | | |||| ||||| | ||| ||| || |||||||
Sbjct 6528 GTTTGTCGTTACGCTTAAAACACGTAAACATGACCTTCCTCTGACCAGGCTTTAGACCAT 6469
Query 167777 C 167777
|
Sbjct 6468 C 6468
>seq3773
Length=92101
Score = 82.4 bits (90), Expect = 9e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 31328 CGAGATTGGGGTCATGCGAAGGACTACGTGGAGGCCATGTGGCTCATGCTTCAACAAGAA 31387
|| |||||||| ||||| | ||||| ||||||||||||||| | ||| | |||| ||
Sbjct 53364 CGCGATTGGGGACATGCCAGCGACTATGTGGAGGCCATGTGGATGATGTTGCAACGGGAG 53423
Query 31388 CGTCCAGATGATTATGTCGTCGCAACAGGTAAATCACATTCTGTACGGGAGTT 31440
|||||| ||| ||||| | ||||| || || ||||| |||||| || ||
Sbjct 53424 AGTCCAGCTGACTATGTTATTGCAACCGGAGAAACACATAGTGTACGAGAATT 53476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588622121132600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |