Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq260 86.0 7e-12 seq3773 82.4 9e-11 >seq260 Length=58366 Score = 86.0 bits (94), Expect = 7e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 |||||||||||| |||| || ||||| |||||||||| || || || | ||| || || Sbjct 6707 ATCCTTGCCACCGGTGAGACGAGTACCGAATTGACCACGGGGTTCCAGCAAATTAATATT 6648 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTT-TCAGCGAGGGAAACTTCGC 167656 || || || ||| | | ||||| || || || || || || || |||||||||| Sbjct 6647 GTTAGATCCGACATAGTTCTGAGCCAAGTTTACAATTGTCATCTGC-AGAGAAACTTCGC 6589 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCAT 167716 |||| ||||| || | | || ||||| | | | ||| || || || || | ||| Sbjct 6588 CGTGATGGTATGCCGACATCTCGGCCACGGAACCAGACAATTGAGCCACTTTGACCTCGC 6529 Query 167717 CTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCAT 167776 |||| || | ||||| | | |||| ||||| | ||| ||| || ||||||| Sbjct 6528 GTTTGTCGTTACGCTTAAAACACGTAAACATGACCTTCCTCTGACCAGGCTTTAGACCAT 6469 Query 167777 C 167777 | Sbjct 6468 C 6468 >seq3773 Length=92101 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 31328 CGAGATTGGGGTCATGCGAAGGACTACGTGGAGGCCATGTGGCTCATGCTTCAACAAGAA 31387 || |||||||| ||||| | ||||| ||||||||||||||| | ||| | |||| || Sbjct 53364 CGCGATTGGGGACATGCCAGCGACTATGTGGAGGCCATGTGGATGATGTTGCAACGGGAG 53423 Query 31388 CGTCCAGATGATTATGTCGTCGCAACAGGTAAATCACATTCTGTACGGGAGTT 31440 |||||| ||| ||||| | ||||| || || ||||| |||||| || || Sbjct 53424 AGTCCAGCTGACTATGTTATTGCAACCGGAGAAACACATAGTGTACGAGAATT 53476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588622121132600