Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 255 7e-63
>seq2144
Length=13752
Score = 255 bits (282), Expect = 7e-63
Identities = 930/1432 (65%), Gaps = 48/1432 (3%)
Strand=Plus/Minus
Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955
|| |||| | ||||||||| | || || ||| |||||||| | |||||||||
Sbjct 4583 TTCACAACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGT 4524
Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015
|| || ||||||||||||||| || || || || || || |||||||||||||| ||
Sbjct 4523 TCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATA 4464
Query 106016 AAAAGACTGTTACGAAGACCCTT-TTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
| ||| ||||| | || | || ||| || |||||||| ||||||| |
Sbjct 4463 AGCAGAGAATTACGCACTCCGTGCTTGCTT-ATCTTCTCCTTGAGTTTCGCCCAGTCCCA 4405
Query 106075 GTTGAGCT-TGGTTTCACCTTC--CCACATATCAAATTGAAGCAC-CCCTTGGGACGTGG 106130
| || | ||| | ||||| |||||||||| | || || | |||||| | |||
Sbjct 4404 GA-GATTTGTGGGT--ACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGG 4348
Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190
| |||||| | |||||||| | || | ||||||| |||||||| || ||||
Sbjct 4347 -ACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCA 4289
Query 106191 GGGATGCGTGATAC---ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247
||||| ||| |||||||| || || | ||||| || | |||
Sbjct 4288 ---ATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCAC 4232
Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307
||| | | || || ||||| || |||| || || |||||||| || | ||||
Sbjct 4231 TCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAA 4172
Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGT 106364
| || | |||| | || || || | || ||| | || || |||| | |
Sbjct 4171 TTGGACGATGTCTTAAGTTGGATTT---CTTAGCCTCGGGCAGAGGGTAGTAATTGATAT 4115
Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424
| |||| ||| | ||||||||||||||||| |||| || | || || || | |
Sbjct 4114 CGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGT 4055
Query 106425 CAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAAT 106478
| || || | ||| | || ||||| ||| || || || ||||||||||
Sbjct 4054 C----GTACGTCT-TCTCCGGTGTTACGAACATA--TTG--AGAGCTATCGATGCCAAAT 4004
Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538
|||||||||| ||||||| | | ||||| | |||||| || |||||||| |
Sbjct 4003 TGCAAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGC 3944
Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598
||||| || |||| ||| | |||||| ||||| ||| |||| ||||||| ||||||
Sbjct 3943 ATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCA 3884
Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA--CATCGGCGGC 106656
|||| || || || |||||| ||||||| | || || ||| | || | | |
Sbjct 3883 TGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGAT-TGAGCC 3825
Query 106657 TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716
| | | || || || || |||||| |||||| ||||| ||||| | |||||||
Sbjct 3824 TTG-ATAACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTT 3766
Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776
|||||| | || | ||| ||||| ||||| || || | || ||||| | |
Sbjct 3765 ATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTC 3706
Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836
| | || || |||||||| || | ||||| |||||||||| | || ||||| |
Sbjct 3705 ATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCG 3646
Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGATATCCG 106895
| ||| || || | || ||| || ||| || | |||||| | || ||| |
Sbjct 3645 AGCACGATGTTCCTCTTTGCCAGTGTT-CTTCTTAAGATCCAAGAACTCAAAGACATCGG 3587
Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTT 106951
||||| ||||| || || | || | || ||| |||| | || ||| | ||||
Sbjct 3586 AATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCG-CCACCCTGATCC 3528
Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011
||||| || || ||||||||| | ||||| |||| | |||| ||| ||||
Sbjct 3527 ACATAACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCA 3468
Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
|| || || | ||| || | ||||| | | ||| | | || ||||||||
Sbjct 3467 TTGGTGCCACTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCA 3408
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
|| || |||||||||| |||||||| | | || | | |||| || | |||||||
Sbjct 3407 CCTGCTGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAG 3348
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191
|| ||| || || ||||| |||| ||| || | || || |||| |
Sbjct 3347 TCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCG 3288
Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAG 107251
|| || ||||||| || || |||| | | || || | | | ||| |||||||
Sbjct 3287 AAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGT 3228
Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
| |||||||| || || || || || |||||||| || ||||| | |||||
Sbjct 3227 GCGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGT 3176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589626317411080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |