Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2144 255 7e-63 >seq2144 Length=13752 Score = 255 bits (282), Expect = 7e-63 Identities = 930/1432 (65%), Gaps = 48/1432 (3%) Strand=Plus/Minus Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955 || |||| | ||||||||| | || || ||| |||||||| | ||||||||| Sbjct 4583 TTCACAACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGT 4524 Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015 || || ||||||||||||||| || || || || || || |||||||||||||| || Sbjct 4523 TCGAAAGATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATA 4464 Query 106016 AAAAGACTGTTACGAAGACCCTT-TTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 | ||| ||||| | || | || ||| || |||||||| ||||||| | Sbjct 4463 AGCAGAGAATTACGCACTCCGTGCTTGCTT-ATCTTCTCCTTGAGTTTCGCCCAGTCCCA 4405 Query 106075 GTTGAGCT-TGGTTTCACCTTC--CCACATATCAAATTGAAGCAC-CCCTTGGGACGTGG 106130 | || | ||| | ||||| |||||||||| | || || | |||||| | ||| Sbjct 4404 GA-GATTTGTGGGT--ACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGG 4348 Query 106131 GAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 106190 | |||||| | |||||||| | || | ||||||| |||||||| || |||| Sbjct 4347 -ACTTCCCTCATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCA 4289 Query 106191 GGGATGCGTGATAC---ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||||| ||| |||||||| || || | ||||| || | ||| Sbjct 4288 ---ATGCGCCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCAC 4232 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||| | | || || ||||| || |||| || || |||||||| || | |||| Sbjct 4231 TCTCATAGGGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAA 4172 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGT 106364 | || | |||| | || || || | || ||| | || || |||| | | Sbjct 4171 TTGGACGATGTCTTAAGTTGGATTT---CTTAGCCTCGGGCAGAGGGTAGTAATTGATAT 4115 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | |||| ||| | ||||||||||||||||| |||| || | || || || | | Sbjct 4114 CGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGT 4055 Query 106425 CAAAAGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 | || || | ||| | || ||||| ||| || || || |||||||||| Sbjct 4054 C----GTACGTCT-TCTCCGGTGTTACGAACATA--TTG--AGAGCTATCGATGCCAAAT 4004 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 |||||||||| ||||||| | | ||||| | |||||| || |||||||| | Sbjct 4003 TGCAAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGC 3944 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 ||||| || |||| ||| | |||||| ||||| ||| |||| ||||||| |||||| Sbjct 3943 ATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCA 3884 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA--CATCGGCGGC 106656 |||| || || || |||||| ||||||| | || || ||| | || | | | Sbjct 3883 TGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATGGCAAACCAAAGGGAT-TGAGCC 3825 Query 106657 TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716 | | | || || || || |||||| |||||| ||||| ||||| | ||||||| Sbjct 3824 TTG-ATAACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTT 3766 Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776 |||||| | || | ||| ||||| ||||| || || | || ||||| | | Sbjct 3765 ATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTC 3706 Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836 | | || || |||||||| || | ||||| |||||||||| | || ||||| | Sbjct 3705 ATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCCCG 3646 Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACTCCATGATATCCG 106895 | ||| || || | || ||| || ||| || | |||||| | || ||| | Sbjct 3645 AGCACGATGTTCCTCTTTGCCAGTGTT-CTTCTTAAGATCCAAGAACTCAAAGACATCGG 3587 Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTT 106951 ||||| ||||| || || | || | || ||| |||| | || ||| | |||| Sbjct 3586 AATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCG-CCACCCTGATCC 3528 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 ||||| || || ||||||||| | ||||| |||| | |||| ||| |||| Sbjct 3527 ACATAACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCA 3468 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || | ||| || | ||||| | | ||| | | || |||||||| Sbjct 3467 TTGGTGCCACTAATCGAAGTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATACCA 3408 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 || || |||||||||| |||||||| | | || | | |||| || | ||||||| Sbjct 3407 CCTGCTGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAG 3348 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191 || ||| || || ||||| |||| ||| || | || || |||| | Sbjct 3347 TCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCG 3288 Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAG 107251 || || ||||||| || || |||| | | || || | | | ||| ||||||| Sbjct 3287 AAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGT 3228 Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | |||||||| || || || || || |||||||| || ||||| | ||||| Sbjct 3227 GCGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGT 3176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589626317411080