Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 138 3e-27
seq7704 134 3e-26
seq355 122 2e-22
>seq2274
Length=37031
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| || | |||||| | ||||| || |||||
Sbjct 30362 GTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTG 30303
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| || || || || ||||||||||| || || ||||| || || ||
Sbjct 30302 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTT 30243
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| ||||||||||| || || ||||| || | ||| | ||||| || ||
Sbjct 30242 GGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCTTGCCAGT 30183
Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142
||| || || ||||| | |||||||
Sbjct 30182 CAAGGTCTTGACGAAAATCTGCATTT 30157
>seq7704
Length=29863
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| |||||||| ||||| |||||||||| ||||| | |||||||| | ||||| ||
Sbjct 18546 GTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCA 18487
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| | || || || ||||||||||| ||||||||||| ||||| || |||
Sbjct 18486 GCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 18427
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || ||||| ||||| ||| || ||||| || | ||||| || || | |||
Sbjct 18426 ACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 18367
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 18366 TTAACGAAGATCTGCAT 18350
>seq355
Length=9390
Score = 122 bits (134), Expect = 2e-22
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| || | ||||| | ||||| || |||||||| || ||||| ||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||| || || || || |||||||| ||||| ||| || ||||||
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|||||||| ||| ||| ||||| | || | ||||| || ||||| ||||| || ||
Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211
Query 195133 ACTTGCATTT 195142
| |||||||
Sbjct 9210 ATCTGCATTT 9201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108798316395389
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |