Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2274 138 3e-27 seq7704 134 3e-26 seq355 122 2e-22 >seq2274 Length=37031 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| || | |||||| | ||||| || ||||| Sbjct 30362 GTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTG 30303 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||||||||| || || ||||| || || || Sbjct 30302 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGATCTT 30243 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| ||||||||||| || || ||||| || | ||| | ||||| || || Sbjct 30242 GGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCTTGCCAGT 30183 Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142 ||| || || ||||| | ||||||| Sbjct 30182 CAAGGTCTTGACGAAAATCTGCATTT 30157 >seq7704 Length=29863 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || |||||||| ||||| |||||||||| ||||| | |||||||| | ||||| || Sbjct 18546 GTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCA 18487 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | || || || ||||||||||| ||||||||||| ||||| || ||| Sbjct 18486 GCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 18427 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || ||||| ||||| ||| || ||||| || | ||||| || || | ||| Sbjct 18426 ACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 18367 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 18366 TTAACGAAGATCTGCAT 18350 >seq355 Length=9390 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| || | ||||| | ||||| || |||||||| || ||||| || Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || ||||| || || || || |||||||| ||||| ||| || |||||| Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCACATTCTCA 9271 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 |||||||| ||| ||| ||||| | || | ||||| || ||||| ||||| || || Sbjct 9270 ATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAAAG 9211 Query 195133 ACTTGCATTT 195142 | ||||||| Sbjct 9210 ATCTGCATTT 9201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108798316395389