Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq7704 84.2 1e-11
seq2274 84.2 1e-11
>seq7704
Length=29863
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| |||||||||||||| || || || || | || |||| |||
Sbjct 18558 ACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCC 18499
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| || || || ||||| || | || ||||| ||| | || | || || ||||| |
Sbjct 18498 AATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGA 18439
Query 34893 ATCTTCTGTTTGACGGATGCTATCG-ATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| |||||| | | || | || | ||| || || || | || ||||| ||
Sbjct 18438 ATCTTGGCTTTGACATTTTCGATGGTATCCGACGG-TTCGACCTCAAGAGTGATGGTCTT 18380
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||||||| || || || |||||||||||
Sbjct 18379 ACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
>seq2274
Length=37031
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| ||||| | || |||| |||
Sbjct 30367 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCC 30308
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||| ||| | || | |||||||||||
Sbjct 30307 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGG 30248
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| ||||| || || || | ||| | ||| || || | ||| ||||| |
Sbjct 30247 ATCTTGGCCTTGAC--ATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCT 30190
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || || | ||||| || || |||||||| ||
Sbjct 30189 TGCCAGTCAAGGTCTTGACGAAAATCTGCATTTT 30156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324443424260376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |