Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 277 2e-69
seq19922 159 4e-34
>seq2144
Length=13752
Score = 277 bits (306), Expect = 2e-69
Identities = 1170/1848 (63%), Gaps = 32/1848 (2%)
Strand=Plus/Minus
Query 46974 TTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCA 47033
|| || |||||||||| ||| | ||| || | || || || | ||||||||| ||
Sbjct 4931 TTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCT 4872
Query 47034 GTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGT 47093
|| || | ||| |||| ||||||| || || | ||| |||| | |||
Sbjct 4871 GTTTTAAGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGGT 4812
Query 47094 TCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCC 47153
|| | | ||||||||||| |||||||| |||||||| || || || | ||| ||||||
Sbjct 4811 TCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCC 4752
Query 47154 ATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCT 47213
|| | | | | || | ||| ||||| || || ||||| | || | | |
Sbjct 4751 ATTTTGATTGTGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCACATTT 4692
Query 47214 TCTGGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgttttttaat 47270
| || | || | ||||| || || || | || | || |||| ||||| |
Sbjct 4691 TGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTTCATA 4632
Query 47271 tcatttgacca-aagtt---ttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326
|||| ||| |||| |||| | || | | | || | |||| |||| ||||
Sbjct 4631 TCATCATCCCACAAGTCCAGTTCGGTTAGATCACGC----AACAAATGATGATTCACAAC 4576
Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386
||||| |||||||| || |||| | | || || || || || ||||| | |||
Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516
Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446
||||||||| || | || || || || ||||| || ||||| | ||| | ||| ||
Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGA-TAAGCAGAG 4457
Query 47447 ATTT-CTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTC---CAATCCCAAAGAT 47502
| || | ||||| | || ||||| ||||| || ||||| ||||
Sbjct 4456 AATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGA---GTTTCGCCCAGTCCCAGAGAT 4400
Query 47503 CTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCAT 47562
|| || || |||||| | |||||| || ||||| || || || | ||| || |
Sbjct 4399 TTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCT 4340
Query 47563 TATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTAT 47622
||| || | ||| | || | | | ||| || ||||| || ||||||||||| | ||
Sbjct 4339 CATAGGTCTCATACGTGCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCAT 4280
Query 47623 AATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTC--AAAAGG 47680
| || || ||||| ||||| | | || ||| | || || || | || | | ||
Sbjct 4279 AGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGC--CTTATCACTCTCATAGGG 4222
Query 47681 ATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATG 47740
||| || | |||||| | ||||||||| ||||| |||||||| | |||
Sbjct 4221 ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATG 4162
Query 47741 AGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATT 47800
|| || || || ||| || || | || || | || ||||| || || || ||
Sbjct 4161 TCTTAAGTTGGATTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATCTTGTT 4102
Query 47801 TAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT 47860
| | ||| | | || ||| || || | || |
Sbjct 4101 CAAGTTTTTGGTAACAATCTTGGTGACCTCTTTGAGCTTCACAAAGTCGTACGTCTTCTC 4042
Query 47861 ---TATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGG 47917
| | || ||| |||| || ||||| ||||| | ||| || ||||| | ||||| |||
Sbjct 4041 CGGTGTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGG 3982
Query 47918 ATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTG 47977
|| ||| | | ||||||| || | |||| ||||| || || |||| ||||||
Sbjct 3981 TGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTG 3922
Query 47978 ATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTAT 48037
|| || | |||||| | |||||| | ||||| | ||||| ||||| || |
Sbjct 3921 TTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCAC 3862
Query 48038 CTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATT 48097
|| || |||||||| | ||||| | |||||| |||||| | ||| |
Sbjct 3861 TTGTGACTCAATGATGGCAAACCAAAGGGATTGAGCCTTGATAACACGATTTGCTCGACC 3802
Query 48098 ATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCC 48157
|| | |||||||| ||||| | || |||||| | ||| || | |||| | | | ||
Sbjct 3801 CTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCC 3742
Query 48158 AGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAA 48217
||||| | | || ||||||| |||||||||||||| || || | |||||||
Sbjct 3741 TGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAA 3682
Query 48218 TATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCAC 48276
| |||||||||||| || || ||| || | ||||| || | |||| || ||||||
Sbjct 3681 CAAATCTGGTATCCACAGGGC-ATAGAACAGATCCCGAGCACGATGTTCCTCTTTGCCAG 3623
Query 48277 TATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTG 48336
| ||| | ||||| || | || || | | ||| | |||||| || || | || || |
Sbjct 3622 TGTTCTTCTTAAGATCCAAGAACTCAAAGACATCGGAATGCCAAGGCTCGAGGTAAATGG 3563
Query 48337 CCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAA 48396
| | | || |||| ||| || || ||||| | ||| | || ||||||| | |
Sbjct 3562 CAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCCACATAACGTGCCACATTGTTAAATA 3503
Query 48397 CTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCAC 48456
|||| | ||| || || | ||||| ||| |||||||||| || ||| || ||||
Sbjct 3502 CTCTCAGCATAGGAACCAAGCCATTGGATGTACCATTGGTGCCACTAATCGAAGTTCCCT 3443
Query 48457 TAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC 48514
| || | || | | | ||| | ||| ||||||||||| || || || | ||
Sbjct 3442 TGGCCCGAATGCAATGCACATT--CAGACCAATACCACCTGCTGACTTTGAGATCATCGC 3385
Query 48515 ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574
|||| | | | | | | | ||||| || || ||| || ||| | | |||||
Sbjct 3384 ACACTGCTCCACAGATTTAAAGATTCCCTCGATTGAGTCAGATACCATGGTGAGGAGAAA 3325
Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634
|| ||||| || || | ||| | | || | |||||| || ||||| |
Sbjct 3324 GCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTGCGAAAAGTGTTGGTGAGGCATGTGT 3265
Query 48635 AAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATG 48694
|| | || || | ||| || || || || | | ||||| ||||| | |||
Sbjct 3264 GAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCAGTGCGGAATCAATATCATCTCCATG 3205
Query 48695 TATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTAT 48754
|||||| || | || ||||| | ||| | || || | |||| ||| |||| ||| ||
Sbjct 3204 TATACCGATGGCAACTCGCATCAGCATGTGCTGTGGACGTTCAGCAACTTTGCCATTGAT 3145
Query 48755 TTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802
||| || | ||| ||| ||||| || || || |||||||| || ||
Sbjct 3144 TTTTAACAAATACGATCGCTCCAAAGTCTTGAATCCAAAATAATTATA 3097
>seq19922
Length=1369
Score = 159 bits (176), Expect = 4e-34
Identities = 429/651 (66%), Gaps = 4/651 (1%)
Strand=Plus/Minus
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|| || ||||| || |||||||| ||||| || ||||| || || || || || || ||
Sbjct 1328 TTGACTGGTAGAGCGTCTGTAAGGAATTCCTGCTCTATCTTCACAGCATCCGAGATGATC 1269
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAA-ACATGCAAA 18968
| | | || | | ||| | | || | || | ||||| | ||| |||||
Sbjct 1268 TCGATGATGCGCTCACGACTGGGACGCTGTACCAAGTGCTGGAACATAAGCACA-GCAAA 1210
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||| ||||| ||||||||||| | |||| ||||| || || || | ||| |||||
Sbjct 1209 ATCGCAATGAAGTCCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCGGGCAT 1150
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| || | || || | |||||| || || ||||| || ||||| || |||||
Sbjct 1149 AAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAAACTGCCGCTGAAGAAGATGCCTTC 1090
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA-ATCCATT 19147
|| || ||||| |||| | | || ||| | | || | || | || |||||
Sbjct 1089 GACAGCAGCAAAGGCAATGATGCGCTCGCCAAAGTTTGCCGCCTTCG-AGGAGATCCAAG 1031
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
||| |||||||| ||||| || ||| ||||| || || || | ||| || || |
Sbjct 1030 ACAGAGCCCAATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAGAGGT 971
Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
| |||| || | ||| || || | || || | | ||||||||||| || |
Sbjct 970 AGTCGCGCTGATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCCGAGT 911
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
| | ||| || || || ||||| || || ||||| || | ||| ||||| || || ||||
Sbjct 910 GGACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAACGTGCCTCTGTGATTTGCACTT 851
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
| | || | ||||| | ||| |||||||| || || ||| || ||||| || |
Sbjct 850 CCTGGCTGAAGCGCTCGACAAGATTCTCATTAACAATGCCGTCAGAGGCGGCAAAGAAAG 791
Query 19388 CTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATAT 19447
| || |||||| ||| || || |||| |||| | | ||| || | || |
Sbjct 790 CCAAAACATGTGAAATGAAGTGACGCTCATTGTCTGTTAGTCGAGCCCAGTCGGTCATGT 731
Query 19448 CTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498
| || |||| ||| ||||| || || ||||| || ||||| || || ||||
Sbjct 730 CCTTGGATAGATCCACTTCCTCCACGGTCCAGAATGAAGCTTCGGCCTTTT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561771063953880
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