Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq8229 239 4e-57
seq6504 105 5e-17
seq11225 95.1 1e-13
seq14110 93.3 3e-13
seq7704 86.0 5e-11
>seq8229
Length=8951
Score = 239 bits (264), Expect = 4e-57
Identities = 407/585 (70%), Gaps = 4/585 (1%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||| | ||||| ||||| || ||||| || ||||| ||||| | || |||| ||
Sbjct 6687 GCTGTCGGTATTGATTTGGGTACCACCTACTCCTGTGTGGGTGTGTTCCAGCATGGCAAG 6628
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
||||| || |||||||| ||||| ||||| | || || ||||| |||||| | ||||||
Sbjct 6627 GTTGAGATCATTGCCAACGATCAGGGTAATCGTACCACCCCATCGTATGTTGCCTTCACG 6568
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| || || | ||| |||||||||| || || | || | | || || ||| |
Sbjct 6567 GATACGGAGCGTTTGATTGGTGATGCTGCCAAGAACCAGGTGGCGATGAACCCAACCCAA 6508
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| || || |||||||| ||| | ||||| | | || |||||||| |||| || |
Sbjct 6507 ACGATCTTCGATGCTAAGCGTCTGATTGGTCGCAAATTCGATGATTCGGCTGTGCAATCC 6448
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||||||||||| ||||||||| | |||| | ||| ||| || || | ||||| | |
Sbjct 6447 GATATGAAGCACTGGCCTTTCGAGGTTGTCAGCGTTGATGGCAAGCCCAAAATTGAGGTT 6388
Query 550292 ACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350
|| | |||||| | || | || | || || | || || || ||||| || |
Sbjct 6387 ACGTA-CAAGGATGAGAAGAAGACCTTCTTCCCCGAGGAGATCTCCTCCATGGTGTTGAC 6329
Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAA 550409
|||||||| | || ||| | | | ||| ||||| || || |||| || || |
Sbjct 6328 CAAAATGAAGGAGACCGCC-GAGGCGTACCTGGGCAAGACTGTCACCAATGCTGTCATTA 6270
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
|||| ||||| ||||| ||||| ||||| ||||| ||||| || |||||||| ||||
Sbjct 6269 CTGTGCCAGCTTATTTCAATGATTCACAGCGTCAGGCTACCAAGGATGCTGGTACCATTG 6210
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
| || | ||||| | ||||| ||||| || || ||||| || || |||| ||||| |
Sbjct 6209 CCGGTTTGAATGTGTTGCGTATCATCAACGAGCCAACTGCCGCGGCCATTGCTTATGGTC 6150
Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT 550574
| || || | || | ||| | |||||| | ||||||||||
Sbjct 6149 TGGACAAGAAGGCTGTTGGAGAGCGTAATGTGTTGATCTTTGATT 6105
>seq6504
Length=17104
Score = 105 bits (116), Expect = 5e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449
||| | | |||| ||| | ||||| || || || || || ||||| || ||||| |||||
Sbjct 5260 AGTCAAGAATGCTGTAGTCACTGTGCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTAC 5201
Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509
|| |||||||| | ||||||||||| ||||| || ||| | ||||| || || |||||
Sbjct 5200 CAAGGATGCTGGTCAAATTGCTGGACTGAATGTGCTGCGTGTCATCAACGAGCCAACTGC 5141
Query 550510 TGCTGCACTTGCATATGG 550527
||||| || || |||||
Sbjct 5140 AGCTGCTCTGGCTTATGG 5123
>seq11225
Length=4956
Score = 95.1 bits (104), Expect = 1e-13
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 931169 AATTCCATTAATATTAGTTAAATCTGATGGAGGATTTACATATGATACCTCTGATTTAGC 931228
||||||| | | | | |||||||||||||| ||||||||||||||||| || ||| || |
Sbjct 3528 AATTCCACTGACAATCGTTAAATCTGATGGTGGATTTACATATGATACTTCAGATATAAC 3469
Query 931229 AGCCATTAAATATAGATTTATGGAACAAAAAGTAGATCGTGTAATTTATGTTGTGGATTC 931288
||| |||| | ||| | |||| || | || | | | |||||||||||||| ||
Sbjct 3468 AGCGCTTAAGCAAAGAATAGAGGAAGAACATGTGAACTGGATTATTTATGTTGTGGACTC 3409
Query 931289 AGGTCAAAGT 931298
|||||||||
Sbjct 3408 TGGTCAAAGT 3399
>seq14110
Length=7795
Score = 93.3 bits (102), Expect = 3e-13
Identities = 125/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 930657 GTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGT 930716
|| ||| |||| ||||| || || |||||||| ||| ||||||| |||| ||||| |||
Sbjct 7765 GTTTTAGTTGACTTTTCCTCTCCGAATATTGCAAAACTAATGCATGTTGGTCATTTACGT 7706
Query 930717 TCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATA--TTGTGGAAGTAAAGTTC 930774
|| || || ||||| || ||| | ||| | | ||| | || | | | | ||||
Sbjct 7705 TCAACTATCATTGGCGAGTCTATCTGTCGCCTTCTTGAGTTCCTTCAGCACG--ATGTTC 7648
Query 930775 ATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826
||| | |||||| | ||||||||||| || ||||| |||||| | |||||
Sbjct 7647 TTCGCATTAATCATTTAGGTGATTGGGGCACTCAATTCGGTATGCTGATTGC 7596
Score = 87.8 bits (96), Expect = 1e-11
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 931166 TGAAATTCCATTAATATTAGTTAAATCTGATGGAGGATTTACATATGATACCTCTGATTT 931225
|| |||||| | | | | || ||||||||||| ||||| || |||||||| |||||| |
Sbjct 6654 TGGAATTCCGCTGACAATTGTAAAATCTGATGGTGGATTCACGTATGATACTTCTGATAT 6595
Query 931226 AGCAGCCATTAAATATAGATTTATGGAACAAAAAGTAGATCGTGTAATTTATGTTGTGGA 931285
| ||||||||||| | ||| || ||| || || | | ||||||||||||||||
Sbjct 6594 AACAGCCATTAAACAAAGAATTGAAGAAGAACTTGTCAACTGGATAATTTATGTTGTGGA 6535
Query 931286 TTCAGGTCAAAGT 931298
| || ||||||
Sbjct 6534 CGCTGGCCAAAGT 6522
>seq7704
Length=29863
Score = 86.0 bits (94), Expect = 5e-11
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343
||||| ||| |||||||| | ||||| | |||||| | ||| || || |||||
Sbjct 18540 TCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAG 18481
Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403
|| | | |||||||| ||||||||||||||||| || ||||| || ||| ||
Sbjct 18480 ATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTT 18421
Query 563404 TCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461
|| || ||||| | || | || || ||||| | || ||||| || || |||||||
Sbjct 18420 TCGATGGTATCCGACGGTTCG-AC-CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAA 18363
Query 563462 CGAAAATTTGCAT 563474
|||| || |||||
Sbjct 18362 CGAAGATCTGCAT 18350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4026754000257830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |