Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq47487 104 2e-17 >seq47487 Length=501 Score = 104 bits (114), Expect = 2e-17 Identities = 323/496 (65%), Gaps = 17/496 (3%) Strand=Plus/Minus Query 119717 TCGTTAATGTCGTTGATCGGATGCGTCGGCAGCGCGATCTCCATACACAGGTTGGACTGC 119776 ||||| | ||| | | ||| | |||||||| ||||| |||| ||||||| ||||||| Sbjct 500 TCGTTGACGTCTTCCAGCGGCTTGGTCGGCAGGGCGATTTCCAGACACAGGCTGGACTGG 441 Query 119777 TTCACCGGGGCCTGTTTAGGGTCAAACGGGCTGTTGGTATTACAGTGGTCAACGTGCTGA 119836 |||||| || | || || |||||||||| ||| || |||||||| |||| ||| Sbjct 440 CGCACCGGCGCGATCTGCGGATCGAACGGGCTGTGGGTGTTGCAGTGGTCGACGTTCTGG 381 Query 119837 ACATAAATACGACCAGTTTGTGAACGCTCCTGCCCAAAGACAGAGAATGCGTCCGCCGCA 119896 | ||| ||||| || || | || || ||| | | ||||| || |||| Sbjct 380 ATATAGATACGGCCGGTAGAGGCGCGTTCTTGCATCATCAGCGAGAACAGCTCAACCGCT 321 Query 119897 GGGATAGACTTCTTCGCCACGGAAGGATCTGCTTCCAGTTCCTCG---TAAAGCTGTTGG 119953 | ||||| || | | | || ||| | | || | || || | | | Sbjct 320 TTCACGCGCTTCTG-GCGAATGCTG--TCGTCTTTCTCGTACTGGGTGTACAGGCGCTCG 264 Query 119954 AATTTCTCCTGATCAGAGAAGAAATATTCGTACAGCTTACCGCCAGCCACGTTCGGATGG 120013 |||| |||||||| | |||||| || |||| | || | ||||| |||| || Sbjct 263 AATTCGTCCTGATCGGCGAAGAACGCGTCATACAAC------CCCGGCACGT-CGGACGG 211 Query 120014 ----AACAACGTGATGTTCTTGCCCTGCTGGAGGCGGGTATAAAGCAGCTTGTTGATCTG 120069 |||| ||||||| | ||| | ||||| || | ||| ||| | ||| Sbjct 210 GCTGAACAGGGTGATGTCTTCGCCTTTGATCAGGCGCTGGTACATCAGACGGTTCAACTG 151 Query 120070 GAGGCCGTAGTCCACATGGCGAGCACGAGTGCTCTCGGTGCCACGGTTGTTCTTCAGAAC 120129 | ||||||||||| ||||| | || ||| || ||| |||||||| ||||| || Sbjct 150 CACGCCGTAGTCCATGTGGCGCACGCGGTTGCCTTCAACGCCGCGGTTGTTTTTCAGCAC 91 Query 120130 GATCAGGCTCTCAAAATCCCAGTGCCACATCGGGTAGAAATAGTTAGCCGATGCCTTACG 120189 | |||||| || | ||| |||||||||||||||||| | | |||| | || Sbjct 90 CAGCAGGCTTTCCACTTCCAGGTGCCACATCGGGTAGAACAGGGTTGCCGCGCCGCCGCG 31 Query 120190 GACGCCGCCCTGAGAG 120205 ||||||||||||||| Sbjct 30 CACGCCGCCCTGAGAG 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477258672695560