Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq47854 111 5e-20 >seq47854 Length=738 Score = 111 bits (122), Expect = 5e-20 Identities = 344/521 (66%), Gaps = 21/521 (4%) Strand=Plus/Plus Query 24720 TTCAGACCAGATTTGAGAGGGCGCCCGGTTGTCGTACTGTCGAACAATGATGGTTGTGTG 24779 ||| | || || || | ||||| ||||| | || |||| ||||| || || || ||| Sbjct 121 TTCCGGCCCGACCTGCGGGGGCGGCCGGTGATTGTGTTGTCCAACAACGACGGCTGCGTG 180 Query 24780 ATTGCGCGCAGCACCGAGGCGAAGCAACTCGGTATCGCAATGGGTGAGCCATACTTCAAA 24839 || || |||||| ||||||||||| || || | | ||||| | ||| || ||||| Sbjct 181 ATCGCCCGCAGCGCCGAGGCGAAGGCGCTGGGCGTGCCGATGGGCGCGCCTTATTTCAAG 240 Query 24840 CAGAAAGA----ACGCTTCCA-GCAATTTGGTGTTGTTTGCTTCAGCAGTAATTATGAGC 24894 ||||| | || | |||| | | | |||| | || || || | || Sbjct 241 ATCAAAGAGGAGATGCGCCGTCGCAACGTCGCGGTGTTCTCCTCC-----AACTACGCGC 295 Query 24895 TTTACGCTGATATGTCGAACCGGGTAATGACCACACTCGAGGAGATGTCGCCGCGGGTAG 24954 | ||||| |||||||| |||||| ||| ||| || ||||||||| ||||| ||| | Sbjct 296 TGTACGCCGATATGTCCCGCCGGGTGATGGACACGCTGGAGGAGATGGCGCCGGCGGTGG 355 Query 24955 AAATTTACAGCATTGATGAGGCTTTT-TGTGATCTGACGGGGATACGAAGCTGCCGGGAT 25013 | || || | || || || ||| || | ||||| | || ||||| || Sbjct 356 AGATCTATTCACTGGACGAAGCCTTTCTGCGGCTGGACGGCGTGGCGC-GCTGCGAGGCG 414 Query 25014 CTGACAGATTTCGGGC-GCGAGATAAGAGCGA-CGGTCCTGAAGCGCAC-GCACCTGACT 25070 ||| | ||||| | ||| | | |||| || | | ||| | ||| |||| Sbjct 415 CTGGAACCGTTCGGCCAGCGGGT---GCGCGATCGCATCCGGCGCGAGCTGCATTTGACG 471 Query 25071 GTCGGCGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCATGCTGCGAAA 25130 ||||| || |||||||| | || ||||| || ||||||||||||||| || || || Sbjct 472 GTCGGGGTCGGCATTGCGCCGAGCAAAACGCTGGCCAAGCTGGCTAACTTCGCGGCCAAG 531 Query 25131 AAGTGGCAGCGCCAGACCGGCGGGGTGGTTGACTTGTCGAACATTGACCGCCAGCGTCGG 25190 || |||| ||| | |||||||| ||||| || || || | | |||||||| Sbjct 532 AAATGGC-GCGGC--ACCGGCGGCGTGGTGGATTTATCCGATCCGGCGCGCCAGCGCAAA 588 Query 25191 CTGCTGGCACTGATACCCGTAGAGGATGTGTGGGGTGTCGG 25231 |||||||| || | || || || || |||||||| || || Sbjct 589 CTGCTGGCGGTGCTTCCGGTGGAAGAAGTGTGGGGCGTGGG 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156959956775412