Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_018279.1
Length=49116
Score E
Sequences producing significant alignments: (Bits) Value
seq47854 111 5e-20
>seq47854
Length=738
Score = 111 bits (122), Expect = 5e-20
Identities = 344/521 (66%), Gaps = 21/521 (4%)
Strand=Plus/Plus
Query 24720 TTCAGACCAGATTTGAGAGGGCGCCCGGTTGTCGTACTGTCGAACAATGATGGTTGTGTG 24779
||| | || || || | ||||| ||||| | || |||| ||||| || || || |||
Sbjct 121 TTCCGGCCCGACCTGCGGGGGCGGCCGGTGATTGTGTTGTCCAACAACGACGGCTGCGTG 180
Query 24780 ATTGCGCGCAGCACCGAGGCGAAGCAACTCGGTATCGCAATGGGTGAGCCATACTTCAAA 24839
|| || |||||| ||||||||||| || || | | ||||| | ||| || |||||
Sbjct 181 ATCGCCCGCAGCGCCGAGGCGAAGGCGCTGGGCGTGCCGATGGGCGCGCCTTATTTCAAG 240
Query 24840 CAGAAAGA----ACGCTTCCA-GCAATTTGGTGTTGTTTGCTTCAGCAGTAATTATGAGC 24894
||||| | || | |||| | | | |||| | || || || | ||
Sbjct 241 ATCAAAGAGGAGATGCGCCGTCGCAACGTCGCGGTGTTCTCCTCC-----AACTACGCGC 295
Query 24895 TTTACGCTGATATGTCGAACCGGGTAATGACCACACTCGAGGAGATGTCGCCGCGGGTAG 24954
| ||||| |||||||| |||||| ||| ||| || ||||||||| ||||| ||| |
Sbjct 296 TGTACGCCGATATGTCCCGCCGGGTGATGGACACGCTGGAGGAGATGGCGCCGGCGGTGG 355
Query 24955 AAATTTACAGCATTGATGAGGCTTTT-TGTGATCTGACGGGGATACGAAGCTGCCGGGAT 25013
| || || | || || || ||| || | ||||| | || ||||| ||
Sbjct 356 AGATCTATTCACTGGACGAAGCCTTTCTGCGGCTGGACGGCGTGGCGC-GCTGCGAGGCG 414
Query 25014 CTGACAGATTTCGGGC-GCGAGATAAGAGCGA-CGGTCCTGAAGCGCAC-GCACCTGACT 25070
||| | ||||| | ||| | | |||| || | | ||| | ||| ||||
Sbjct 415 CTGGAACCGTTCGGCCAGCGGGT---GCGCGATCGCATCCGGCGCGAGCTGCATTTGACG 471
Query 25071 GTCGGCGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCATGCTGCGAAA 25130
||||| || |||||||| | || ||||| || ||||||||||||||| || || ||
Sbjct 472 GTCGGGGTCGGCATTGCGCCGAGCAAAACGCTGGCCAAGCTGGCTAACTTCGCGGCCAAG 531
Query 25131 AAGTGGCAGCGCCAGACCGGCGGGGTGGTTGACTTGTCGAACATTGACCGCCAGCGTCGG 25190
|| |||| ||| | |||||||| ||||| || || || | | ||||||||
Sbjct 532 AAATGGC-GCGGC--ACCGGCGGCGTGGTGGATTTATCCGATCCGGCGCGCCAGCGCAAA 588
Query 25191 CTGCTGGCACTGATACCCGTAGAGGATGTGTGGGGTGTCGG 25231
|||||||| || | || || || || |||||||| || ||
Sbjct 589 CTGCTGGCGGTGCTTCCGGTGGAAGAAGTGTGGGGCGTGGG 629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156959956775412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |