Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2274 105 5e-18 seq7704 96.9 3e-15 >seq2274 Length=37031 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || || ||||| ||||| ||| | ||| Sbjct 30376 AGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGA 30317 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || || || ||||| ||||| ||||| | |||| |||||| Sbjct 30316 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCC 30257 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||||| || Sbjct 30256 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTG 30197 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || || ||||||||||| Sbjct 30196 ATGGTCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159 >seq7704 Length=29863 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | || |||||| ||||| |||||||| || ||| | || Sbjct 18567 AGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGG 18508 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| || ||||| |||| ||||| ||||| | |||| || || Sbjct 18507 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCT 18448 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | || |||| || ||||| | || Sbjct 18447 TTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTG 18388 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 || || || ||||| | ||||| || || ||||||||||| Sbjct 18387 ATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCATCGT 18347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380714440444641