Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq47487 188 8e-43 >seq47487 Length=501 Score = 188 bits (208), Expect = 8e-43 Identities = 279/390 (72%), Gaps = 14/390 (4%) Strand=Plus/Plus Query 40960 GCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41019 || || |||||||| || |||||||| || || || || || |||||||||| || ||| Sbjct 1 GCCGTCAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTGTTCTACCCG 60 Query 41020 ATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41079 || ||||| || ||||| |||| |||| |||| |||||||| ||||| |||||||||| Sbjct 61 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGCGGCGTTGAAGGC 120 Query 41080 AACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTA 41139 ||||| | || ||| |||| || ||||| ||| | ||| | ||||||| |||| | Sbjct 121 AACCGCGTGCGCCACATGGACTACGGCGTGCAGTTGAACCGTCTGATGTACCAGCGCCTG 180 Query 41140 ATCAATAACGATTACATCACTCTGTTCAGCC---CTGACGTTGCGAACGATCGCCTGTAT 41196 ||||| ||| ||||||| |||||||||| | ||||| || | ||||| Sbjct 181 ATCAAAGGCGAAGACATCACCCTGTTCAGCCCGTCCGACGTGCCG------GGGTTGTAT 234 Query 41197 GACGCGTTCTATCAAGCGGATCAGACTGAGTTTGAAGAACTGTATA-CCAGTCTTGAAAA 41255 |||||||||| || || |||||| || || || ||||| | ||||| || || Sbjct 235 GACGCGTTCT-TC--GCCGATCAGGACGAATTCGAGCGCCTGTACACCCAGT-ACGAGAA 290 Query 41256 AGACCCAACGGTACGCAAGAAACGCATCAAAGCGGTAGATCTGTTCCAGTTGCTTGTTCA 41315 |||| | | ||| |||| ||| | |||||||| || |||||| | || | | || Sbjct 291 AGACGACAGCATTCGCCAGAAGCGCGTGAAAGCGGTTGAGCTGTTCTCGCTGATGATGCA 350 Query 41316 GGAACGCGCACAGACCGGACGCAACTACAT 41345 |||||||| ||||| || | ||| || Sbjct 351 AGAACGCGCCTCTACCGGCCGTATCTATAT 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569747068789960