Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_019398.1
Length=178193
Score E
Sequences producing significant alignments: (Bits) Value
seq47487 188 8e-43
>seq47487
Length=501
Score = 188 bits (208), Expect = 8e-43
Identities = 279/390 (72%), Gaps = 14/390 (4%)
Strand=Plus/Plus
Query 40960 GCGGTTAAATCCTGTTCCCAGGGCGGTGTTCGTGGTGGTGCAGCAACCCTGTATTATCCG 41019
|| || |||||||| || |||||||| || || || || || |||||||||| || |||
Sbjct 1 GCCGTCAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTGTTCTACCCG 60
Query 41020 ATCTGGCATCTTGAAGTTGAAAACCTGTTGGTTCTGAAAAATAACCGTGGCGTTGAAGAA 41079
|| ||||| || ||||| |||| |||| |||| |||||||| ||||| ||||||||||
Sbjct 61 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGCGGCGTTGAAGGC 120
Query 41080 AACCGTATTCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTA 41139
||||| | || ||| |||| || ||||| ||| | ||| | ||||||| |||| |
Sbjct 121 AACCGCGTGCGCCACATGGACTACGGCGTGCAGTTGAACCGTCTGATGTACCAGCGCCTG 180
Query 41140 ATCAATAACGATTACATCACTCTGTTCAGCC---CTGACGTTGCGAACGATCGCCTGTAT 41196
||||| ||| ||||||| |||||||||| | ||||| || | |||||
Sbjct 181 ATCAAAGGCGAAGACATCACCCTGTTCAGCCCGTCCGACGTGCCG------GGGTTGTAT 234
Query 41197 GACGCGTTCTATCAAGCGGATCAGACTGAGTTTGAAGAACTGTATA-CCAGTCTTGAAAA 41255
|||||||||| || || |||||| || || || ||||| | ||||| || ||
Sbjct 235 GACGCGTTCT-TC--GCCGATCAGGACGAATTCGAGCGCCTGTACACCCAGT-ACGAGAA 290
Query 41256 AGACCCAACGGTACGCAAGAAACGCATCAAAGCGGTAGATCTGTTCCAGTTGCTTGTTCA 41315
|||| | | ||| |||| ||| | |||||||| || |||||| | || | | ||
Sbjct 291 AGACGACAGCATTCGCCAGAAGCGCGTGAAAGCGGTTGAGCTGTTCTCGCTGATGATGCA 350
Query 41316 GGAACGCGCACAGACCGGACGCAACTACAT 41345
|||||||| ||||| || | ||| ||
Sbjct 351 AGAACGCGCCTCTACCGGCCGTATCTATAT 380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569747068789960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |