Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq47809 91.5 3e-14 seq32861 84.2 5e-12 >seq47809 Length=786 Score = 91.5 bits (100), Expect = 3e-14 Identities = 166/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 22037 CGCTGCTGGCTGAGCGCAAGGCCGCTTTTGTGGCTCTTTATCCTGTGGATGAACAG---G 22093 |||||||||| || ||||||||| | | | | ||||| || ||| || ||| | Sbjct 5 CGCTGCTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCC---GGAAGAGCAGCGCG 61 Query 22094 ACGCGGTGCGGCGCACGCTGGCGCTGGAATCTGAACCCGTCACCAAGCTGCTGCAGGAAA 22153 | || | ||||| ||||||||||||| || || || ||| ||| |||| |||| Sbjct 62 AAGCCATCGCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAA 121 Query 22154 GCACATACCGCGAAATCCTGCTGCGCCAGCGTATTAACGAAGCTGCGCAGGCGGTGATGG 22213 | ||||||||| | ||| | |||||||| | || ||||| || |||| |||||| Sbjct 122 ATGCTTACCGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGC 181 Query 22214 TGGCCTATTCGATGGGAAATGATCTTGAGCAGCTGGCAGCCAACTGCAACGTGAAACGTC 22273 ||| ||| | | || | || || || || |||| || |||| | | ||| ||| | Sbjct 182 TGGGTTATGCCAGCGGCAGCGACCTCGACCAACTGGGCGCAAACTTCCAGGTGCGACGCC 241 Query 22274 TG 22275 || Sbjct 242 TG 243 >seq32861 Length=992 Score = 84.2 bits (92), Expect = 5e-12 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 32257 CCGGAAGTGACCGGCGGCAGACTGTCATTACTGGCGCTTGAACAAATGGCTGAACTGGGC 32316 |||||||| ||||| || | | | ||||| |||||||| | | ||||||| | ||| Sbjct 528 CCGGAAGTAACCGGAGGGACATTATCATTGATGGCGCTTCAGCTCATGGCTGCCCAAGGC 587 Query 32317 AAGGCATGGCCTTTGATTCAAGGCAGTGGAACCATTTACGGCATGTTTGTTATTGAGAGT 32376 | || ||||| |||| | |||| |||||| ||| | || |||| ||| ||||| || Sbjct 588 AGAGCCTGGCCGCTGATCGAGGGCAATGGAACTATTCATGGGATGTATGTCATTGAAAGC 647 Query 32377 CTGAGCCAGACAAAGACGGAGTTTTTTGCCAGCGGAATGCCCAGGCGCATTGAGTTTACG 32436 | | | || || || || |||| | | ||| | | | | || ||||||||| Sbjct 648 ATAGTCGACACGAAAACCCAGCTTTTCTCGAACGGCAGCGCGCGACAGATAGAGTTTACG 707 Query 32437 ATCACCCTCAAACGGGTTGATGAGTCGCT 32465 |||| || | || |||||||| ||||| Sbjct 708 ATCAATCTGATGCGCGTTGATGAATCGCT 736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108990553138866