Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq36792 179 9e-41 >seq36792 Length=516 Score = 179 bits (198), Expect = 9e-41 Identities = 147/179 (82%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 4938 ACCGCCAAGCCGTACAGCGATATCCAGTTCGCCACGCAGATCACGCCGGTCACCACCATC 4997 ||| | |||||||||||||||||||| ||||| ||||||||||||| ||| | Sbjct 506 ACCACGAAGCCGTACAGCGATATCCAATTCGCTGAAAAGATCACGCCGGTTCGCACGTTG 447 Query 4998 GCGCACATGTTCAAGGCGTCCAAACAGATTCTGGATGACTTCGCGCAGCTGCAGTCCACT 5057 || || |||||||| || ||||| |||||||||||||||||||| |||||||| || || Sbjct 446 GCACATATGTTCAAAGCCTCCAAGCAGATTCTGGATGACTTCGCACAGCTGCAATCGACC 387 Query 5058 ATCGACGCCGAGATGCGTTACGGACTGAAGTATGTGGAAGAACAGGAAATTCTCTTTGG 5116 || || || |||||||||||||| ||||||||||| ||||| ||||| ||||| || || Sbjct 386 ATTGATGCAGAGATGCGTTACGGCCTGAAGTATGTCGAAGAGCAGGAGATTCTGTTCGG 328 Score = 114 bits (126), Expect = 3e-21 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 5285 GGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCCTGGCGAACCCAGCGGC 5344 ||| | |||||| || ||| ||| ||||||||||||||||||| || || ||||| || Sbjct 155 GGCCACGATTGAGCTGCTCAAGGACTCGCTGGGCCGCTATATCCTCGCCAATCCAGCAGC 96 Query 5345 CCTGACTGGCCCTACCCTTTGGGGCCTGCCGGTGGTAGCAACCGAAGCCGCAGCATTCCA 5404 || || ||||| || || |||||| |||| || || || || || | || || |||| Sbjct 95 GCTAACCGGCCCGACTCTCTGGGGCTTGCCTGTTGTCGCGACGGAGTCAGCGGCGTTCCT 36 Query 5405 GGGCAAGTTCCTGACCGGTGCATTCA 5430 ||| || |||||||||||||| |||| Sbjct 35 GGGTAAATTCCTGACCGGTGCTTTCA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120113800411878