Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_019720.1
Length=44120
Score E
Sequences producing significant alignments: (Bits) Value
seq39136 98.7 3e-16
>seq39136
Length=791
Score = 98.7 bits (108), Expect = 3e-16
Identities = 335/515 (65%), Gaps = 13/515 (3%)
Strand=Plus/Plus
Query 33552 TCGCCAAAAAGCAGTTCTGCCGGAGCGACGCCCAAAGCTTTAGCTATTACCTCTGCGTCA 33611
|| ||||| || | ||||| || | |||||||| ||| || | || ||| ||
Sbjct 188 TCACCAAATAGTAATTCTGAAGGGGAGACGCCCAGAGCCTTTGAAATCGTTATTGCATCG 247
Query 33612 TCAACACTAACGCTTCTGGTTC--CTGATTCATAGTTGCCGATCCGAGATTGTGAAGCCC 33669
|| | || || | || | || || | ||| |||| || || || ||||| || ||
Sbjct 248 TCGATGCTGACCCCTC--GCTCAGCTAACTCAAAGTTTCCTATACGCGATTGAGACTTCC 305
Query 33670 AGCCGCAAAGCTCCGCCAGAGCCTTCTGTGAAAGCCCTTTATCTTCCCGTAATCGCTTGA 33729
| |||||| | || || |||| || ||||| || | | | || | ||||
Sbjct 306 ATCCGCAACGGATTGCAAGTTCCTTTTGAGAAAGGCCCCTGGAAGCTCTTAGTGATTTGA 365
Query 33730 TACGCGCGGCGATAGTTTCTGTTCTGTTCATGCGCATTTTATATCACATTCCGTGGTTTA 33789
|| || ||||| |||| | ||||||| ||||| || |||| |||| | |
Sbjct 366 GGCGTGCCGCGATTTTTTCATTCGTGTTCATATCAATTTTCTACCACAAAGCGTGTTAAA 425
Query 33790 AGGCTTTACACGATTTGTGTTGACTATCAAT-CACAATATGTGTTTAATAAAGACTGAGT 33848
|||||| |||| |||||||| | | || |||| | ||||||||| | | |
Sbjct 426 TGGCTTTTCACGTTTTGTGTTTGCATTGAAAACACATTTCGTGTTTAATT--GTTT---T 480
Query 33849 GAACTAGCTCTTAA--GGAAAC-CTATGAACAACATTGCCAACGAACGGAAAAAGCTTGG 33905
| | | | |||| |||| | |||||||||||||||||| || ||||||| || ||
Sbjct 481 CAGCAACCCATTAACAGGAATCACTATGAACAACATTGCCACAGAGAGGAAAAAACTGGG 540
Query 33906 CATCACTCAATCTGCGTTAGCAGGCGCGTGTGGCTGGAACCAGTCCCGCTTAGCTAACTA 33965
||| || || |||| ||| |||| || || || |||| || || | | || |||||
Sbjct 541 CATAACCCAGTCTGTGTTGGCAGAGGCCTGCGGTTGGACTCAATCGAGAGTTGCCAACTA 600
Query 33966 CGAGTCAGGTATCCGGACTCCAGATTTAGAGTCGTGCCGTCGCCTGGTAAAGGCGCTGAA 34025
||||| || || || | ||||| || | ||||| | ||||||| | || ||
Sbjct 601 TGAGTCTGGCATTCGCATCCCAGACCTAAACGGCTGCCGCCACCTGGTATCAGTCCTAAA 660
Query 34026 TAAATTGGGGAGCAAGACAACGCTAGATGGCTTGT 34060
||| || || || | ||| ||||| | ||||
Sbjct 661 TAACTTAGGAAGTGAAGCAAATCTAGACGATTTGT 695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140981882199228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |