Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_019932.1
Length=29564
Score E
Sequences producing significant alignments: (Bits) Value
seq47809 192 1e-44
>seq47809
Length=786
Score = 192 bits (212), Expect = 1e-44
Identities = 180/227 (79%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 3469 GTTTGCGCCGAGCTGGTCAAGGTCACCGTCACTGGCGTAGGCCACCATATTTGCCTGCGC 3528
||||||||| || ||||| ||||| | | | ||||| || ||| ||| |||| ||
Sbjct 225 GTTTGCGCCCAGTTGGTCGAGGTCGCTGCCGCTGGCATAACCCAGCATCACGGCCTTTGC 166
Query 3529 CGCTTCATTCACGCGCTGGCGCAGAATGACCTCGCGGTAGGCGTTTTCCTGTAACAGCTT 3588
|||||||||||||||||||| | | | |||||||| || ||||| || ||||| ||
Sbjct 165 GGCTTCATTCACGCGCTGGCGTAACAGCAGTTCGCGGTAAGCATTTTCTTGCAACAGTTT 106
Query 3589 CACAATCGGCTCAGACTCCAGCGCCAGCGTGCGGGCAATGG--TCGCCTGCTGCTCAGCC 3646
|| |||||||| || |||||||||| |||||||| |||| |||| ||||||| ||
Sbjct 105 GACGATCGGCTCCGATTCCAGCGCCAATGTGCGGGCGATGGCTTCGC--GCTGCTCTTCC 48
Query 3647 GGGTAAAGCGAAATCAGCGTGGCTTTGCGTTCGGCCAGCAGCGTTTC 3693
|||||||| |||||||||||||| ||||| ||||||||||||| |||
Sbjct 47 GGGTAAAGGGAAATCAGCGTGGCCTTGCGATCGGCCAGCAGCGATTC 1
Score = 127 bits (140), Expect = 4e-25
Identities = 210/303 (69%), Gaps = 0/303 (0%)
Strand=Plus/Minus
Query 2904 TGTCCAGCACCACGTCGGCCGCCGGCTGCGCCAGTTCAACACGCTGCACGCCCTCAACAT 2963
|||||| | | ||||||| ||| | || |||||| || ||||| || || |||
Sbjct 709 TGTCCAATTCGATGTCGGCCTGCGGGGTCTTCAATTCAACGCGTTGCACCCCTTCGGCAT 650
Query 2964 GCAGCGCGGCATACAGCGCTGACTTGCGAATGTCACGGCCGAGGCGGGCCTGCGCGCTGA 3023
|||| ||||| || | || ||| ||||||||||||||| | ||| ||| |||||||
Sbjct 649 GCAGTGCGGCGTAGATTGCCGACAAGCGAATGTCACGGCCTAAACGGTGCTGGGCGCTGA 590
Query 3024 CAAAGGCAGCGAGCTTTTTCTCGGCAGCGGCGCGCACAGGTTCAGCTTCCGGCCCCGGAT 3083
| || || ||||||||| ||||| ||||| ||||| || || || |
Sbjct 589 TGTAATTTTTCAGTTTGGCTTCGGCAGCGCGACGCACCGGTTCTGCTTCAGGGCCAGGGT 530
Query 3084 AGAGGTACAGCGCCGCCTCAACGGCATAATTTACGATAGCGGCCGACTGCACCGTGACGC 3143
|||||||||| | || || | | || | | ||| ||| || | || |||||||
Sbjct 529 AGAGGTACAGTACGGCATCGATGTTGTAGCTGATGATGTTGGCAGAGCGGACGGTGACGC 470
Query 3144 GATCGGCCACCGGGCGCACGTTCTCATCGTTCAGCGCGGCATCCACCACGGCCAGCAGGT 3203
||||||||||||||||| | | |||||||||| ||| ||| || | ||| ||| |
Sbjct 469 GATCGGCCACCGGGCGCTCATCTTCATCGTTCAACGCTTTATCGACGATCGCCGCCAGTT 410
Query 3204 CGG 3206
|||
Sbjct 409 CGG 407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94429269402804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |