Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq47809 192 1e-44 >seq47809 Length=786 Score = 192 bits (212), Expect = 1e-44 Identities = 180/227 (79%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 3469 GTTTGCGCCGAGCTGGTCAAGGTCACCGTCACTGGCGTAGGCCACCATATTTGCCTGCGC 3528 ||||||||| || ||||| ||||| | | | ||||| || ||| ||| |||| || Sbjct 225 GTTTGCGCCCAGTTGGTCGAGGTCGCTGCCGCTGGCATAACCCAGCATCACGGCCTTTGC 166 Query 3529 CGCTTCATTCACGCGCTGGCGCAGAATGACCTCGCGGTAGGCGTTTTCCTGTAACAGCTT 3588 |||||||||||||||||||| | | | |||||||| || ||||| || ||||| || Sbjct 165 GGCTTCATTCACGCGCTGGCGTAACAGCAGTTCGCGGTAAGCATTTTCTTGCAACAGTTT 106 Query 3589 CACAATCGGCTCAGACTCCAGCGCCAGCGTGCGGGCAATGG--TCGCCTGCTGCTCAGCC 3646 || |||||||| || |||||||||| |||||||| |||| |||| ||||||| || Sbjct 105 GACGATCGGCTCCGATTCCAGCGCCAATGTGCGGGCGATGGCTTCGC--GCTGCTCTTCC 48 Query 3647 GGGTAAAGCGAAATCAGCGTGGCTTTGCGTTCGGCCAGCAGCGTTTC 3693 |||||||| |||||||||||||| ||||| ||||||||||||| ||| Sbjct 47 GGGTAAAGGGAAATCAGCGTGGCCTTGCGATCGGCCAGCAGCGATTC 1 Score = 127 bits (140), Expect = 4e-25 Identities = 210/303 (69%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 2904 TGTCCAGCACCACGTCGGCCGCCGGCTGCGCCAGTTCAACACGCTGCACGCCCTCAACAT 2963 |||||| | | ||||||| ||| | || |||||| || ||||| || || ||| Sbjct 709 TGTCCAATTCGATGTCGGCCTGCGGGGTCTTCAATTCAACGCGTTGCACCCCTTCGGCAT 650 Query 2964 GCAGCGCGGCATACAGCGCTGACTTGCGAATGTCACGGCCGAGGCGGGCCTGCGCGCTGA 3023 |||| ||||| || | || ||| ||||||||||||||| | ||| ||| ||||||| Sbjct 649 GCAGTGCGGCGTAGATTGCCGACAAGCGAATGTCACGGCCTAAACGGTGCTGGGCGCTGA 590 Query 3024 CAAAGGCAGCGAGCTTTTTCTCGGCAGCGGCGCGCACAGGTTCAGCTTCCGGCCCCGGAT 3083 | || || ||||||||| ||||| ||||| ||||| || || || | Sbjct 589 TGTAATTTTTCAGTTTGGCTTCGGCAGCGCGACGCACCGGTTCTGCTTCAGGGCCAGGGT 530 Query 3084 AGAGGTACAGCGCCGCCTCAACGGCATAATTTACGATAGCGGCCGACTGCACCGTGACGC 3143 |||||||||| | || || | | || | | ||| ||| || | || ||||||| Sbjct 529 AGAGGTACAGTACGGCATCGATGTTGTAGCTGATGATGTTGGCAGAGCGGACGGTGACGC 470 Query 3144 GATCGGCCACCGGGCGCACGTTCTCATCGTTCAGCGCGGCATCCACCACGGCCAGCAGGT 3203 ||||||||||||||||| | | |||||||||| ||| ||| || | ||| ||| | Sbjct 469 GATCGGCCACCGGGCGCTCATCTTCATCGTTCAACGCTTTATCGACGATCGCCGCCAGTT 410 Query 3204 CGG 3206 ||| Sbjct 409 CGG 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94429269402804