Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq47487 96.9 3e-15 >seq47487 Length=501 Score = 96.9 bits (106), Expect = 3e-15 Identities = 276/415 (67%), Gaps = 17/415 (4%) Strand=Plus/Minus Query 79391 ACACAGGTTGGACTGTTTCACCGGAGCCTGTTCTGGG--TCAAACGGGCTGTTAGTGTTG 79448 ||||||| ||||||| |||||| || | |||| | || |||||||||| |||||| Sbjct 456 ACACAGGCTGGACTGGCGCACCGGCGC--GATCTGCGGATCGAACGGGCTGTGGGTGTTG 399 Query 79449 CAGTGGTCAACGTGCTGCACGTAAATACGGCCCGTCTGTGAACGCTCTTGCCCAAATACG 79508 |||||||| |||| ||| | || |||||||| || | || |||||| | | Sbjct 398 CAGTGGTCGACGTTCTGGATATAGATACGGCCGGTAGAGGCGCGTTCTTGCATCATCAGC 339 Query 79509 GAGAAGGCATCCGCCGCCGAAATGGTTTTCTTCGCCACAGAAGGATCTGCTTCCAGTTCC 79568 ||||| || |||| | | |||| || | | | || ||| | | | Sbjct 338 GAGAACAGCTCAACCGCTTTCACGCGCTTCTG-GCGAATGCTG--TCGTCTTTCTCGTAC 282 Query 79569 TCG---TAAAGCTGTTGGAATTTCTCCTGATTAGAGAAGAAATACTCATACAACTTACCT 79625 | | || || | | ||||| ||||||| | |||||| ||||||||| || Sbjct 281 TGGGTGTACAGGCGCTCGAATTCGTCCTGATCGGCGAAGAACGCGTCATACAAC---CCC 225 Query 79626 TCCGCCGCGTTAGGGTGGAACAATGTAATGTTCTTACCCTGCTGG--AGGCGAGAGTACA 79683 | | || ||| ||||| || |||| ||| ||| || ||||| ||||| Sbjct 224 GGCACGTCGGACGGGCTGAACAGGGTGATGT-CTTCGCCTT-TGATCAGGCGCTGGTACA 167 Query 79684 GCATTTTGTTCAACTGGAGTCCGTAGTCCACGTGGCGAGCACGGGTGCTCTCAGTACCTC 79743 || ||||||||| | |||||||||| |||||| | ||| ||| ||| || | Sbjct 166 TCAGACGGTTCAACTGCACGCCGTAGTCCATGTGGCGCACGCGGTTGCCTTCAACGCCGC 107 Query 79744 GGTTGTTCTTCAGCACAATCAGACTTTCGAAATCCCAGTGCCACATCGGGTAGAA 79798 ||||||| |||||||| | ||| ||||| | ||| |||||||||||||||||| Sbjct 106 GGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGGTGCCACATCGGGTAGAA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455115185331880