Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2144 255 7e-63 >seq2144 Length=13752 Score = 255 bits (282), Expect = 7e-63 Identities = 1146/1781 (64%), Gaps = 60/1781 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| || || ||||| || || || || || |||||||| | Sbjct 3169 CCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGATTCCGCA 3228 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||||||| ||| | | | || || | | |||| || || ||||||| || ||| Sbjct 3229 CTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAACACTTTTC 3288 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 |||| || || | || ||| |||| ||||| || || ||| ||| Sbjct 3289 GCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCACCATGGTATCTGAC 3348 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 |||||| | || |||| | | || | | |||||||| |||||||||| || || Sbjct 3349 TCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTCAGCAGGT 3408 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 |||||||| || | | ||| | | ||||| | || ||| | || || ||| Sbjct 3409 GGTATTGGTCTGAATGTGCATTGCATTCGGGCCAAGGGAACTTCGATTAGTGGCACCAAT 3468 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 ||| ||| |||| | |||| ||||| | ||||||||| || || ||||| Sbjct 3469 GGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTTATGTG 3528 Query 75572 AATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 |||| | | |||| | ||| || | | || | ||| | || || |||||| | Sbjct 3529 GATCAGG-GTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGGCATTC 3587 Query 75628 CGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 |||| || | |||||| | || ||| || ||| || | || || ||| | Sbjct 3588 CGATGTCTTTGAGTTCTTGGATCTTAAGAAG-AACACTGGCAAAGAGGAACATCGTGCTC 3646 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 | ||||| || | |||||||||| ||||| | || |||||||| || || | || Sbjct 3647 GGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGCCAATG 3706 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | ||||| || | || || ||||| ||||| ||| | || | |||||| Sbjct 3707 AGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGGTGATA 3766 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866 ||||||| | ||||| ||||| || || |||||||| |||| ||| || | | || Sbjct 3767 AGTTTGAGGAGCTCTATACAAAATACGAGAAGGAGGGTCGAGCAAAT-CGTGTTATCAAG 3825 Query 75867 CCGCCGATG--TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 | | || ||||| || || | | ||||| ||||||||| ||||| || || Sbjct 3826 GCTCA-ATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACACCGTACAT 3884 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| | ||||||| | |||||| ||||| |||||| | ||| |||| ||||| || | Sbjct 3885 GCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACAATTAAATG 3944 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 | || | ||||| |||||| | ||||| | | ||||||| ||||||||||| Sbjct 3945 CAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGATTGCTGTTTGCAA 4004 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCGCACTTTTGA 76098 ||||||||| || || || ||| ||||| || | ||| | || || || Sbjct 4005 TTTGGCATCGATAGCTCT--CAA--TATGTTCGTAACACCGGAGA-AGACGTAC----GA 4055 Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158 | || || || | || |||| ||||||||||||||||| | ||| |||| || Sbjct 4056 CTTTGTGAAGCTCAAAGAGGTCACCAAGATTGTTACCAAAAACTTGAACAAGATCATCGA 4115 Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215 | |||| || || | ||| || | || || || | |||| | || || Sbjct 4116 TATCAATTACTACCCTCTGCCCGAGGCTAAG---AAATCCAACTTAAGACATCGTCCAAT 4172 Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTC 76275 ||| | || |||||||| || || |||| || ||||| || || | | ||| Sbjct 4173 TGGAATTGGAGTTCAAGGACTTGCAGATGCTTTGATTTTAATGCGGTATCCCTATGAGAG 4232 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT---GTATCACGCATCCCT 76332 ||| | || ||||| | || || |||||||| ||| ||||| | Sbjct 4233 TGATAAGGCGTGTCTTCTGAATCAACAGATATTCGAAACCATTTACTATGGCGCAT---T 4289 Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392 ||| || || ||||| ||||||| | || | |||||||| | |||||| ||| Sbjct 4290 GGAAGCCAGCTGTGAGCTGGCTGAGAAAGATGGCACGTATGAGACCTATGAGGGAAGTCC 4349 Query 76393 CGCGTCCCAAGGG-GTGCTTCAGTTTGATATGTGG--GAAGGTGAAACCA-AGCTCAACT 76448 | | |||||| | || |||| |||||||||| ||||| | ||| | || || Sbjct 4350 AG-TTAGCAAGGGTATTCTCCAGTATGATATGTGGAATAAGGT--ACCCACAAATC-TCT 4405 Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 ||||||| |||||||| || | || | || | ||||| ||| | | Sbjct 4406 GGGACTGGGCGAAACTCAAGGAGAAGATAAGCAAGCACGGAGTGCGTAATTCTCTGCTTA 4465 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 | |||||||||||||| || || || || || || ||||||||||||||| || |||| Sbjct 4466 TCGCACCAATGCCAACGGCATCGACAGCCCAGATAATGGGTAATAATGAATCTTTCGAAC 4525 Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 | ||||| ||||||||||| ||| || || | || |||||| |||| || Sbjct 4526 CCTACACTTCAAACATCTACACAAGACGAGTGCTGTCTGGAGAGTTTCAGGTTGTGAATC 4585 Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTC-TCTGGTCCAAGGATATGAAGGATCTC 76687 | || | | ||| || || | ||| | | ||| | |||||||| ||| Sbjct 4586 ATCATTTGTTGCGTGATCT-AACCGAACTGGACTTGTGGGATGATGATATGAAAAATCAA 4644 Query 76688 ATGGT-GAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT-CAAGA 76745 || | | ||| |||| ||||| ||||| ||| | | || || | || | | || Sbjct 4645 ATAATCGCAAG-TCGTGGCTCCATACAAAACATCGAAAACATTCCTCAAAATGTGCGTGA 4703 Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTC-ATTGACATGGCCGCAGAT 76804 | || || || || |||||||| | |||| | || | ||||| |||||| Sbjct 4704 A-CTATATAAGACCGTTTGGGAAAT-ATCCGTAAAGTCCACAATCAAAATGGCAGCAGAT 4761 Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA---AAGTCCAACG 76861 ||||| |||||||||||||||||| | || |||||||| | | | || Sbjct 4762 CGTGGAGCTTTCATTGATCAAAGTCAATCCTTTAA--TATTCATGTAGCTGAACCAAATT 4819 Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921 ||| ||||| | || || ||| | | | | |||||| ||| || ||||| |||||| Sbjct 4820 ATG-GTAAGCTGACATCCATTCATTTCTTCTCCTGGAAAGCGGGTCTTAAAACAGGAATG 4878 Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTT 76962 || ||||| || | ||| || |||| | |||||||| Sbjct 4879 TATTATCTTCGCACTAAGCCGGCAGCCAATGCTATTCAGTT 4919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596211158612960