Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 255 7e-63
>seq2144
Length=13752
Score = 255 bits (282), Expect = 7e-63
Identities = 1146/1781 (64%), Gaps = 60/1781 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| | ||||| || || ||||| || || || || || |||||||| |
Sbjct 3169 CCACAGCACATGCTGATGCGAGTTGCCATCGGTATACATGGAGATGATATTGATTCCGCA 3228
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331
||||||| ||| | | | || || | | |||| || || ||||||| || |||
Sbjct 3229 CTGGAGACTTACAATTTGCTTTCGGAACGCTTCTTCACACATGCCTCACCAACACTTTTC 3288
Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391
|||| || || | || ||| |||| ||||| || || ||| |||
Sbjct 3289 GCAGCTGCAACCACACGCCCTCAGCTGTCTTCATGCTTTCTCCTCACCATGGTATCTGAC 3348
Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451
|||||| | || |||| | | || | | |||||||| |||||||||| || ||
Sbjct 3349 TCAATCGAGGGAATCTTTAAATCTGTGGAGCAGTGTGCGATGATCTCAAAGTCAGCAGGT 3408
Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511
|||||||| || | | ||| | | ||||| | || ||| | || || |||
Sbjct 3409 GGTATTGGTCTGAATGTGCATTGCATTCGGGCCAAGGGAACTTCGATTAGTGGCACCAAT 3468
Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571
||| ||| |||| | |||| ||||| | ||||||||| || || |||||
Sbjct 3469 GGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTTATGTG 3528
Query 75572 AATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627
|||| | | |||| | ||| || | | || | ||| | || || |||||| |
Sbjct 3529 GATCAGG-GTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGGCATTC 3587
Query 75628 CGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686
|||| || | |||||| | || ||| || ||| || | || || ||| |
Sbjct 3588 CGATGTCTTTGAGTTCTTGGATCTTAAGAAG-AACACTGGCAAAGAGGAACATCGTGCTC 3646
Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746
| ||||| || | |||||||||| ||||| | || |||||||| || || | ||
Sbjct 3647 GGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGCCAATG 3706
Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806
| ||||| || | || || ||||| ||||| ||| | || | ||||||
Sbjct 3707 AGGATTGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGGTGATA 3766
Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866
||||||| | ||||| ||||| || || |||||||| |||| ||| || | | ||
Sbjct 3767 AGTTTGAGGAGCTCTATACAAAATACGAGAAGGAGGGTCGAGCAAAT-CGTGTTATCAAG 3825
Query 75867 CCGCCGATG--TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924
| | || ||||| || || | | ||||| ||||||||| ||||| || ||
Sbjct 3826 GCTCA-ATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACACCGTACAT 3884
Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984
||| | ||||||| | |||||| ||||| |||||| | ||| |||| ||||| || |
Sbjct 3885 GCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACAATTAAATG 3944
Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
| || | ||||| |||||| | ||||| | | ||||||| |||||||||||
Sbjct 3945 CAGTAACTTGTGCACTGAAATTGTTGAGTATTCTGCACCAGATGAGATTGCTGTTTGCAA 4004
Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCGCACTTTTGA 76098
||||||||| || || || ||| ||||| || | ||| | || || ||
Sbjct 4005 TTTGGCATCGATAGCTCT--CAA--TATGTTCGTAACACCGGAGA-AGACGTAC----GA 4055
Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158
| || || || | || |||| ||||||||||||||||| | ||| |||| ||
Sbjct 4056 CTTTGTGAAGCTCAAAGAGGTCACCAAGATTGTTACCAAAAACTTGAACAAGATCATCGA 4115
Query 76159 CAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTAT 76215
| |||| || || | ||| || | || || || | |||| | || ||
Sbjct 4116 TATCAATTACTACCCTCTGCCCGAGGCTAAG---AAATCCAACTTAAGACATCGTCCAAT 4172
Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTC 76275
||| | || |||||||| || || |||| || ||||| || || | | |||
Sbjct 4173 TGGAATTGGAGTTCAAGGACTTGCAGATGCTTTGATTTTAATGCGGTATCCCTATGAGAG 4232
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT---GTATCACGCATCCCT 76332
||| | || ||||| | || || |||||||| ||| ||||| |
Sbjct 4233 TGATAAGGCGTGTCTTCTGAATCAACAGATATTCGAAACCATTTACTATGGCGCAT---T 4289
Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392
||| || || ||||| ||||||| | || | |||||||| | |||||| |||
Sbjct 4290 GGAAGCCAGCTGTGAGCTGGCTGAGAAAGATGGCACGTATGAGACCTATGAGGGAAGTCC 4349
Query 76393 CGCGTCCCAAGGG-GTGCTTCAGTTTGATATGTGG--GAAGGTGAAACCA-AGCTCAACT 76448
| | |||||| | || |||| |||||||||| ||||| | ||| | || ||
Sbjct 4350 AG-TTAGCAAGGGTATTCTCCAGTATGATATGTGGAATAAGGT--ACCCACAAATC-TCT 4405
Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508
||||||| |||||||| || | || | || | ||||| ||| | |
Sbjct 4406 GGGACTGGGCGAAACTCAAGGAGAAGATAAGCAAGCACGGAGTGCGTAATTCTCTGCTTA 4465
Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568
| |||||||||||||| || || || || || || ||||||||||||||| || ||||
Sbjct 4466 TCGCACCAATGCCAACGGCATCGACAGCCCAGATAATGGGTAATAATGAATCTTTCGAAC 4525
Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628
| ||||| ||||||||||| ||| || || | || |||||| |||| ||
Sbjct 4526 CCTACACTTCAAACATCTACACAAGACGAGTGCTGTCTGGAGAGTTTCAGGTTGTGAATC 4585
Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTC-TCTGGTCCAAGGATATGAAGGATCTC 76687
| || | | ||| || || | ||| | | ||| | |||||||| |||
Sbjct 4586 ATCATTTGTTGCGTGATCT-AACCGAACTGGACTTGTGGGATGATGATATGAAAAATCAA 4644
Query 76688 ATGGT-GAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT-CAAGA 76745
|| | | ||| |||| ||||| ||||| ||| | | || || | || | | ||
Sbjct 4645 ATAATCGCAAG-TCGTGGCTCCATACAAAACATCGAAAACATTCCTCAAAATGTGCGTGA 4703
Query 76746 ATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTC-ATTGACATGGCCGCAGAT 76804
| || || || || |||||||| | |||| | || | ||||| ||||||
Sbjct 4704 A-CTATATAAGACCGTTTGGGAAAT-ATCCGTAAAGTCCACAATCAAAATGGCAGCAGAT 4761
Query 76805 CGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA---AAGTCCAACG 76861
||||| |||||||||||||||||| | || |||||||| | | | ||
Sbjct 4762 CGTGGAGCTTTCATTGATCAAAGTCAATCCTTTAA--TATTCATGTAGCTGAACCAAATT 4819
Query 76862 ATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATG 76921
||| ||||| | || || ||| | | | | |||||| ||| || ||||| ||||||
Sbjct 4820 ATG-GTAAGCTGACATCCATTCATTTCTTCTCCTGGAAAGCGGGTCTTAAAACAGGAATG 4878
Query 76922 TACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTT 76962
|| ||||| || | ||| || |||| | ||||||||
Sbjct 4879 TATTATCTTCGCACTAAGCCGGCAGCCAATGCTATTCAGTT 4919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596211158612960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |