Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_021221.1
Length=45781
Score E
Sequences producing significant alignments: (Bits) Value
seq14068 89.7 2e-13
>seq14068
Length=5400
Score = 89.7 bits (98), Expect = 2e-13
Identities = 181/266 (68%), Gaps = 2/266 (1%)
Strand=Plus/Minus
Query 1139 CCGAAGGGGGTCTATGGGCGTCTCGCTCCTCGTTCGGGGCTGGCGGTGAAACACTTTATC 1198
||| |||| ||| || || | || || ||||| |||||||| || || |||| ||
Sbjct 3358 CCGGAGGGTTCCTACGGCCGAGTGGCCCCACGTTCTGGGCTGGCCGTAAAGAACTTCATT 3299
Query 1199 GATGTGGGGGCGGGCGTGATAGACGGCGACTATCGAGGCATCGTGTGCGTGCTGCTGTTT 1258
|||||||| || ||||| | |||| ||||| || |||| | || | || ||||||||
Sbjct 3298 GATGTGGGTGCCGGCGTTGTGGACGAGGACTACCGCGGCAACCTGGGAGTCGTGCTGTTT 3239
Query 1259 AATTTCTCAGACAGCGATTACCACGTGCGGTGCGGCGATAGGGTCGTGCAATTGATTCTA 1318
|| || |||| ||||| | ||| | |||||||| | ||| ||||| |||
Sbjct 3238 AACCATTCGGACACCGATTTTGAGGTGAAGCGCGGCGATCGCATCGCACAATTCATTTGC 3179
Query 1319 GAAAGACACCTGATTGCC-GATTTGCATGAGGTCGACCACCTGCGTCCGACCGAGCGCGG 1377
||| | || || | || || ||| | ||||||| | ||| | || | ||| ||
Sbjct 3178 GAACG-CATCTTCTATCCAGAGTTGGAACAGGTCGATAAACTGGATGACACTGTGCGTGG 3120
Query 1378 CGACTCCGGTTTCGGTTCCACCGGCG 1403
|| ||||||||||| || ||||
Sbjct 3119 TGAAGGTGGTTTCGGTTCAACTGGCG 3094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146294048306322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |