Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq47487 150 2e-31 >seq47487 Length=501 Score = 150 bits (166), Expect = 2e-31 Identities = 260/370 (70%), Gaps = 16/370 (4%) Strand=Plus/Plus Query 41894 GCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTATTATCCG 41953 || || |||||||| || || || || || || || || || ||||| ||| || ||| Sbjct 1 GCCGTCAAATCCTGCTCTCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTGTTCTACCCG 60 Query 41954 ATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAAAAC 42013 || ||||| ||||||| |||| ||||||||| |||||||||||| || |||||| | Sbjct 61 ATGTGGCACCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGCGGCGTTGAAGGC 120 Query 42014 AACCGTATCCGTCACCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAACGTTTG 42073 ||||| | || ||| |||| || ||||| ||| | ||| | ||||||| | || || Sbjct 121 AACCGCGTGCGCCACATGGACTACGGCGTGCAGTTGAACCGTCTGATGTACCAGCGCCTG 180 Query 42074 ATGAATAACGATTACATCACTCTGTTCAGCC---CTGATGTTGCTAACGATCGTCTGTAT 42130 || || ||| ||||||| |||||||||| | || | ||| || | ||||| Sbjct 181 ATCAAAGGCGAAGACATCACCCTGTTCAGCCCGTCCGACG-TGC---CG--GGGTTGTAT 234 Query 42131 GATGCGTTCTATCAAGCGGATCAGACTGAATTCGAAGAACTGTATACCAGCCTTGAAAAA 42190 || ||||||| || || |||||| |||||||| ||||| ||| || ||| Sbjct 235 GACGCGTTCT-TC--GCCGATCAGGACGAATTCGAGCGCCTGTACACCCAGTACGAGAAA 291 Query 42191 GACCCGACTG--TACGCAAGAAACGTATTAAAGCGGTAGATCTGTTCCAGTTGCTTGCAC 42248 || |||| | | ||| |||| || | |||||||| || |||||| | || | | Sbjct 292 GA--CGACAGCATTCGCCAGAAGCGCGTGAAAGCGGTTGAGCTGTTCTCGCTGATGATGC 349 Query 42249 AGGAACGCGC 42258 | |||||||| Sbjct 350 AAGAACGCGC 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563459648778840