Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq44159 158 2e-33 >seq44159 Length=807 Score = 158 bits (174), Expect = 2e-33 Identities = 385/583 (66%), Gaps = 48/583 (8%) Strand=Plus/Minus Query 87549 CTTATCTTCGCCACCGGCGAAGCGGGGTGTGGGAAAACGTTTATTTCCGCCGCATACGCT 87608 || |||||||||||||||||||| || |||| ||||| || || |||||| | || Sbjct 788 CTGATCTTCGCCACCGGCGAAGCCGGCGGTGGCAAAACATTCATCAGCGCCGCCAAGGCG 729 Query 87609 TGCGAACGTTTGCTGGCC---AAAGATATCGAACGTATCATCGTCACTCGTCCGGTGCTC 87665 ||| | | |||| | ||||| | || || || ||||| || ||||| || | Sbjct 728 -GCGGAGGC--GCTGATCCATAAAGAGGTGGATCGGATTATCGTTACCCGTCCTGTTTTG 672 Query 87666 TCCGCAGATGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCGTAC 87725 || |||||||| | || ||| |||| || || | |||| || |||||||| || Sbjct 671 CAGGCGGATGAAGACCTCGGTTTCTTGCCGGGGGATATCTCCGAGAAGTTCGCCCCTTAT 612 Query 87726 TTCCGCCCTGTTTATGACGTTCTTCAAAAACGTCTCGGTAGCCGCTACCTGCAATACTGC 87785 |||||||| || |||||| |||| | ||| | || || |||| |||||| Sbjct 611 TTCCGCCCGGTGTATGACATTCTGGTACGTCGTTTAGGATCTTCCTTTTTGCAGTACTGC 552 Query 87786 CTTAAGCCCGGTA-TCGACAAAGTGGAGATTGCTCCTTTTGCG----------------- 87827 || |||||| | ||| ||| || |||||||| || || || Sbjct 551 CTGC-GCCCGGAAATCGGCAAGGTAGAGATTGCGCCGTTCGCNNNNNNNNNNNNNNNNNN 493 Query 87828 -----------------TACATGCGTGGCCGCAGTTTCGAAAATGCGGTTGTCATTTTAG 87870 || ||||| || |||| |||||||||||||| || || | | Sbjct 492 NNNNNNNNNNNNNNNNNTATATGCGCGGACGCACCTTCGAAAATGCGGTCGTTATCCTGG 433 Query 87871 ATGAAGCTCAGAACACTACTGCTCAG-CAGATGAAGCTCTTCCTGACACGTATCGGGGAG 87929 ||||||| |||||| || || ||| |||||||| | |||||||| || | ||||| Sbjct 432 ATGAAGCCCAGAACGTGACCGC-CAGCCAGATGAAAATGTTCCTGACCCGCCTGGGGGAA 374 Query 87930 AACTGTATCGTTATCGTAAACGGTGACGTCACACAGTGCGACTTGCCCAAAGGGGTGAAG 87989 ||| | |||||||| ||||| ||||| || ||||||||| |||| || ||||| Sbjct 373 AACGTGACGGTTATCGTTAACGGCGACGTGACCCAGTGCGACCTGCCGCGCGGCGTGAAA 314 Query 87990 TCTGGACTGGCCGACGCGTTGACCCGTTTCGAGGAAGACGATTTAGTTGGCGTCGTTCGT 88049 || || || ||| || || || ||||| || ||||| | | ||||| | || Sbjct 313 TCCGGTCTCAGCGATGCCCTGGAGCGCTTCGAAGAGGACGAGATGATCGGCGTTATCCGC 254 Query 88050 TTTACGAAAGACGACTGTGTGCGCTCTTTGCTTTGT--CAGCG 88090 ||| ||| | ||||| |||||||| ||||||| ||||| Sbjct 253 TTTGAAAAACAGGACTGCGTGCGCTC--CGCTTTGTGCCAGCG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716206217736680