Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2144 233 2e-56 seq7704 138 1e-27 seq42801 125 6e-24 seq2274 91.5 1e-13 seq355 87.8 2e-12 >seq2144 Length=13752 Score = 233 bits (258), Expect = 2e-56 Identities = 1197/1884 (64%), Gaps = 71/1884 (4%) Strand=Plus/Minus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 |||||||||||||||| || |||| || || || || || | |||||||||||||| Sbjct 4931 TTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCT 4872 Query 138214 GTTTTTA-ACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCG 138271 ||||| | |||| ||||| ||| | | | || || || || || | || | ||| | | Sbjct 4871 GTTTTAAGACCCGCTTTCC-AGGAGAAGAAATGAATGGATGTCAGCTTAC-CATAATTTG 4814 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| || | | || ||||| |||||||| ||||| |||||||| || ||||| | Sbjct 4813 GTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTG 4754 Query 138332 CCATGTTAATTAAATTTTTACTTTTC----ATCTCCCACACGGTCTTGTATAGATCACGA 138387 |||| || ||| | ||||| | || ||||| |||||||| ||||| ||||| Sbjct 4753 CCATTTTGATTG----TGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC 4698 Query 138388 ATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447 | || | | || || || | || ||||| ||| || || || || ||||| Sbjct 4697 ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTT 4638 Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507 |||| ||||| | ||| | || | | | | || | || || || | Sbjct 4637 TTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACA 4578 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 |||||||| || || | || ||||| | ||| ||||| ||| | || || || Sbjct 4577 ACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAA 4518 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 ||||| || || |||| ||||| || || | || || ||||| || | | ||| Sbjct 4517 GATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGA 4458 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATT--CGT-TCCTTGAGCGACGACCAGTCCCACAAA 138684 ||||| || | ||||| |||| || | | |||||||| || ||||||||| | | Sbjct 4457 GAATTACGCACTCCGTG---CTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGA 4401 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 | | ||| || ||||||||||| ||||| | || ||| || | ||||| || Sbjct 4400 TTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGC---GCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || || | || || ||| |||| | |||| ||| ||| || || | || Sbjct 4340 TCATAGGTCTCATACGTGCCA---TCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCG 4284 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 ||||||||||| |||||| ||||| ||||| || | | |||| | ||||| || Sbjct 4283 CCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAG 4224 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 || || | | | || || || || || ||||| || || | ||| | || ||| Sbjct 4223 GGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGA 4164 Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATT 138978 || | | || || ||| || ||| | ||| || || || | ||||||||| Sbjct 4163 TGTCTTAAGTTGGA---TTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATC 4107 Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGT 139037 ||||| || ||| || | ||| || | |||| | | | |||| ||||| || Sbjct 4106 TTGTTCAAGTTTTTGGTAACAATCTTGGTGACCT-CTTTGAGCTTCACAAAGTCGTACGT 4048 Query 139038 GCCC-CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGC 139096 | ||| ||| |||| ||| ||| || | ||||| || | |||| Sbjct 4047 CTTCTCCGGTGTT----ACGA-----ACATATT----GAGAGCTATCGATGCCAAATTGC 4001 Query 139097 ACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACT 139156 | || || | || || || | || || |||||||| | ||||| ||||| || | Sbjct 4000 AAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATT 3941 Query 139157 TGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATAT 139216 | || || || | ||||||||| ||||| || |||||||| | ||| ||| | ||||| | Sbjct 3940 TAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGT 3881 Query 139217 ACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC--AAGTCCCT-AGCTT 139273 ||||||||||||| |||||||||| ||| ||||| ||| ||| | ||| | Sbjct 3880 ACGGTGTGCCAGTCTCCACTTGTGACTC---AATGATGGCAAACCAAAGGGATTGAGCCT 3824 Query 139274 GTATTTGACGCACGTAAAGTTCG----TCGCGCTCGTACTTTTCGTAGAGTTCGTCGAAT 139329 || |||| | ||| || |||||| ||| ||||| || || || Sbjct 3823 TGAT----AACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAAC 3768 Query 139330 CGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACG 139389 ||||| | | |||| || | ||||||||| || ||||| || ||||| | Sbjct 3767 TTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCC 3708 Query 139390 CCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCG 139449 | || || | |||||| |||| |||| ||| || ||||||| || | | || ||| Sbjct 3707 TCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCC 3648 Query 139450 CGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCA 139509 || || | || || || |||| || | | | ||| ||||| || || Sbjct 3647 CGAGCACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCG 3588 Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCG 139566 | ||||| || || || || ||||| | || || | ||| |||||| ||||| Sbjct 3587 GAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCC 3528 Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626 || | ||| | |||| || ||||| | || ||| || ||| || | | ||| || Sbjct 3527 ACATAACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCA 3468 Query 139627 TTGGTGCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTC 139684 ||||||| || || | | ||| | || || | | ||| ||||| | || || | Sbjct 3467 TTGGTGCCACTAATCGAA--GTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATAC 3410 Query 139685 CGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGC 139744 | || | | || || || | | || | | | | | || || || Sbjct 3409 CACCTGCTGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTG 3350 Query 139745 TGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTG 139804 ||| ||| |||| ||||||||||| || || || || || | || | |||| Sbjct 3349 AGTCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTG 3290 Query 139805 CAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGA 139864 | || || || || || || ||||| | ||| ||| | ||| | ||| || || | Sbjct 3289 CGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCA 3230 Query 139865 TGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGA 139924 ||| ||||||| ||| || ||||||| | |||||||||||||| || || Sbjct 3229 GTGCGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTG 3170 Query 139925 TCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTA 139982 ||||| || || ||| | ||||||| || ||| | || ||| | |||||| | Sbjct 3169 GACGTTCAGCAACTTTGCCATTGATTTTTAACAAATACGATCG--CTCCAAAGTCTTGAA 3112 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||||| || ||||| ||||| Sbjct 3111 TCCAAAATAATTATAGCCAAAATC 3088 >seq7704 Length=29863 Score = 138 bits (152), Expect = 1e-27 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||||||||||||||| ||||||| || || ||||| || || || || || || ||| | Sbjct 18346 TACGATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACC 18405 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 | || || | |||| || ||| ||||| || |||||||||||||| ||||| || Sbjct 18406 GTCGGATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGA 18465 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||| || |||||||||||||| || || || |||| ||| | | | || ||||| Sbjct 18466 TCAGCAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTA 18525 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| || || || ||| | ||||||||| Sbjct 18526 CAACATTCAGAAAGAGTCAACATTGCACTTGGTG 18559 >seq42801 Length=1186 Score = 125 bits (138), Expect = 6e-24 Identities = 486/755 (64%), Gaps = 18/755 (2%) Strand=Plus/Minus Query 56014 TCGCCGTTATCGGCGTCGATTTCCCACGAAAAAACACCGTCCAAATCGTTGTCGATCACG 56073 |||||||| || |||||||| ||||| || || | ||| ||| | || || | |||| Sbjct 759 TCGCCGTTGTCCGCGTCGATCTCCCAGGAGAATAGGCCGCCCAGCTGCTTATCCAACACG 700 Query 56074 TAACGGCATTTGTCGGCGACGGTTTCGACACTGTCAAAGGTTATCAAGTCGCCGGTGCTC 56133 || || |||| | | | | || ||||||||| |||| ||||||||| | Sbjct 699 TACTTGCCTTTGGCCTGCCCCGAGCGGGCATCGTCAAAGGTGATCAGATCGCCGGTGGTA 640 Query 56134 GCTTTAAAAACGTACGCCGCTTTGGCAGTTTCGTCGTACGTGTACTCGTAATTGGC---C 56190 | ||| || ||||| | ||||| || || ||||||| ||||||| | | | | | Sbjct 639 GGTTTGAACACGTAAGGCGCTTCCGCCGTGGCGTCGTAGGTGTACTGCCACTCGCCGCTC 580 Query 56191 AGG---TTGTTATGAATTTGTCTATAGTCGACGACTCCGTCCTCCCATGTGCCGGACACG 56247 | | | | | || || | ||||| |||| |||| |||||| ||||| || Sbjct 579 ATGAACTGGCTGGCGATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGACC 520 Query 56248 GGCCCCGAAGCAGAGGCACCCACGAACGGATGATCTTTCGTGAAATTAGTCACTCCGGTC 56307 ||||| | || | | || ||||||| | ||| | | |||| |||||| Sbjct 519 GGCCCGGTGGCGGTG---CCGGTGAACGGAATGTTGTTCTGGTAGCCGTTCACCCCGGTC 463 Query 56308 CAACCTCTGCCGTACATGGCGACACCGAGCACTATCTTGTTCGGCTTTACGCCCTGCTGG 56367 ||||| | ||| ||||||||| |||| || |||||| |||||| ||||||||| Sbjct 462 CAACCGCGGCCATACATGGCGGTGCCGACGACGATCTTGCCCGGCTTGACGCCCTGCGCC 403 Query 56368 AGGAGAGCGTGCACAGCGAAATCTGTCGTATAT-CGTTCTGCCTTGTTCCATTCGGGCGC 56426 || || || | ||| || | || || || || | | | | |||| | ||||| Sbjct 402 AGCAGCGCATTCACGCCGTTCACCGTGGTGTAGGCGGTGTCCGGT-TTCCCGGCCGGCGC 344 Query 56427 GTAAACGTTCGTATGGTAGCCCAAATCCG--AGTTGGACCAAGCGCCTTTGAAATCGTAA 56484 | | || || | |||| | || | || | ||||| | ||| ||||| Sbjct 343 ATTCAGCGCGGTCTGATGCCCCAGGTTTTTCAGATCGA--AGGCGCCGTAGAAGTCGTAG 286 Query 56485 TTCATCAAAAATATTTTGTCAAGATACGTTTGCGCCTCGTCGTAATCGACGACGGCTATC 56544 |||||| || || | | | | | ||||| ||| ||| | || | | ||| Sbjct 285 CTCATCAGGAAGATGTGAACCATCGAGATCTGCGCGACGTTGTATGCCACCTTGTCGATC 226 Query 56545 TTATCGTATCCCGCGCTTATCGCGCTCGTGAGTTGGAATTTACGACCCGTTTCGATCTCC 56604 || || | || ||||| || ||| || || | | || || || ||||| | | Sbjct 225 TTGTCCTTGCCGGCGCTGATGGCGGAGGTCAGCTCATACTTGCGGCCGGTTTCCGCCGAC 166 Query 56605 AACTGGTCGAGCATATGTCTCAACTCCTTCAACAGAATCACATAAGTCGACCCGTCGTGT 56664 | ||| || ||||| | || || |||| ||| | ||||||||| |||||| || Sbjct 165 AGCTGATCCAGCATCGCCCGCAGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTCCTGA 106 Query 56665 GCTGGATCACCTAACAGGGGATTGGCGCCTTTGCCACCCGGAAACTCCCAGTCGATGTCG 56724 | || | || | ||| |||||||||||||| ||||| || ||||||||||| || Sbjct 105 G--GGCTGCCCAGATTCGGG-TTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCC 49 Query 56725 ACTCCATCGAAGAATTTCCACGTTAGTAGAAACTC 56759 || || |||||||| ||||| || | || ||||| Sbjct 48 ACGCCGTCGAAGAACTTCCAGGTCTGCAGGAACTC 14 >seq2274 Length=37031 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| ||||| || ||| ||||||| || || || Sbjct 30243 AAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAG 30302 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 |||||||||||| | | | || || || ||||| || ||||| || || || ||| Sbjct 30303 CAGCTGGAGGATGGTCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCAACCCTCCAC 30362 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 |||||| | || |||| || || Sbjct 30363 TTGGTGCTCCGTCTGCGTGGTGG 30385 >seq355 Length=9390 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| | || || || || || || | ||||| ||| | || Sbjct 9203 ATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCTTCC 9262 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||||||||| || || || || || ||||| Sbjct 9263 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCAGATCAG 9322 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || ||| | || || ||||| || |||||||||||| Sbjct 9323 CAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGAT 9358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449627284650760