Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 233 2e-56
seq7704 138 1e-27
seq42801 125 6e-24
seq2274 91.5 1e-13
seq355 87.8 2e-12
>seq2144
Length=13752
Score = 233 bits (258), Expect = 2e-56
Identities = 1197/1884 (64%), Gaps = 71/1884 (4%)
Strand=Plus/Minus
Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213
|||||||||||||||| || |||| || || || || || | ||||||||||||||
Sbjct 4931 TTATCTACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCT 4872
Query 138214 GTTTTTA-ACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCG 138271
||||| | |||| ||||| ||| | | | || || || || || | || | ||| | |
Sbjct 4871 GTTTTAAGACCCGCTTTCC-AGGAGAAGAAATGAATGGATGTCAGCTTAC-CATAATTTG 4814
Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331
||| || | | || ||||| |||||||| ||||| |||||||| || ||||| |
Sbjct 4813 GTTCAGCTACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTG 4754
Query 138332 CCATGTTAATTAAATTTTTACTTTTC----ATCTCCCACACGGTCTTGTATAGATCACGA 138387
|||| || ||| | ||||| | || ||||| |||||||| ||||| |||||
Sbjct 4753 CCATTTTGATTG----TGGACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGC 4698
Query 138388 ATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447
| || | | || || || | || ||||| ||| || || || || |||||
Sbjct 4697 ACATTTTGAGGAATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTT 4638
Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507
|||| ||||| | ||| | || | | | | || | || || || |
Sbjct 4637 TTCATATCATCATCCCACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACA 4578
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
|||||||| || || | || ||||| | ||| ||||| ||| | || || ||
Sbjct 4577 ACCTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAA 4518
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
||||| || || |||| ||||| || || | || || ||||| || | | |||
Sbjct 4517 GATTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGA 4458
Query 138628 GAATTCCGTAAACCGTGAAGCTTGATT--CGT-TCCTTGAGCGACGACCAGTCCCACAAA 138684
||||| || | ||||| |||| || | | |||||||| || ||||||||| | |
Sbjct 4457 GAATTACGCACTCCGTG---CTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGA 4401
Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744
| | ||| || ||||||||||| ||||| | || ||| || | ||||| ||
Sbjct 4400 TTTGTGGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341
Query 138745 TCGTACGAATCGTATACACCAAACTCTTGC---GCCAACTCGTTGCTCGCCTCGAGCGCA 138801
|| || | || || ||| |||| | |||| ||| ||| || || | ||
Sbjct 4340 TCATAGGTCTCATACGTGCCA---TCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCG 4284
Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861
||||||||||| |||||| ||||| ||||| || | | |||| | ||||| ||
Sbjct 4283 CCATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAG 4224
Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921
|| || | | | || || || || || ||||| || || | ||| | || |||
Sbjct 4223 GGATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGA 4164
Query 138922 TGGCGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATT 138978
|| | | || || ||| || ||| | ||| || || || | |||||||||
Sbjct 4163 TGTCTTAAGTTGGA---TTTCTTAGCCTCGGGCAGAGGGTAGTAATTGATATCGATGATC 4107
Query 138979 TTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT-CAAAATCGTATGT 139037
||||| || ||| || | ||| || | |||| | | | |||| ||||| ||
Sbjct 4106 TTGTTCAAGTTTTTGGTAACAATCTTGGTGACCT-CTTTGAGCTTCACAAAGTCGTACGT 4048
Query 139038 GCCC-CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGC 139096
| ||| ||| |||| ||| ||| || | ||||| || | ||||
Sbjct 4047 CTTCTCCGGTGTT----ACGA-----ACATATT----GAGAGCTATCGATGCCAAATTGC 4001
Query 139097 ACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACT 139156
| || || | || || || | || || |||||||| | ||||| ||||| || |
Sbjct 4000 AAACAGCAATCTCATCTGGTGCAGAATACTCAACAATTTCAGTGCACAAGTTACTGCATT 3941
Query 139157 TGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATAT 139216
| || || || | ||||||||| ||||| || |||||||| | ||| ||| | ||||| |
Sbjct 3940 TAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGT 3881
Query 139217 ACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC--AAGTCCCT-AGCTT 139273
||||||||||||| |||||||||| ||| ||||| ||| ||| | ||| |
Sbjct 3880 ACGGTGTGCCAGTCTCCACTTGTGACTC---AATGATGGCAAACCAAAGGGATTGAGCCT 3824
Query 139274 GTATTTGACGCACGTAAAGTTCG----TCGCGCTCGTACTTTTCGTAGAGTTCGTCGAAT 139329
|| |||| | ||| || |||||| ||| ||||| || || ||
Sbjct 3823 TGAT----AACACGATTTGCTCGACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAAC 3768
Query 139330 CGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACG 139389
||||| | | |||| || | ||||||||| || ||||| || ||||| |
Sbjct 3767 TTATCACCCCAAACATCAGCGAGTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCC 3708
Query 139390 CCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCG 139449
| || || | |||||| |||| |||| ||| || ||||||| || | | || |||
Sbjct 3707 TCATTGGCTTCCACGCGCTTCATAAACAAATCTGGTATCCACAGGGCATAGAACAGATCC 3648
Query 139450 CGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCA 139509
|| || | || || || |||| || | | | ||| ||||| || ||
Sbjct 3647 CGAGCACGATGTTCCTCTTTGCCAGTGTTCTTCTTAAGATCCAAGAACTCAAAGACATCG 3588
Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCG 139566
| ||||| || || || || ||||| | || || | ||| |||||| |||||
Sbjct 3587 GAATGCCAAGGCTCGAGGTAAATGGCAAAAGCTCCAGGTCTTTTGCCGCCACCCTGATCC 3528
Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626
|| | ||| | |||| || ||||| | || ||| || ||| || | | ||| ||
Sbjct 3527 ACATAACGTGCCACATTGTTAAATACTCTCAGCATAGGAACCAAGCCATTGGATGTACCA 3468
Query 139627 TTGGTGCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTC 139684
||||||| || || | | ||| | || || | | ||| ||||| | || || |
Sbjct 3467 TTGGTGCCACTAATCGAA--GTTCCCTTGGCCCGAATGCAATGCACATTCAGACCAATAC 3410
Query 139685 CGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGC 139744
| || | | || || || | | || | | | | | || || ||
Sbjct 3409 CACCTGCTGACTTTGAGATCATCGCACACTGCTCCACAGATTTAAAGATTCCCTCGATTG 3350
Query 139745 TGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTG 139804
||| ||| |||| ||||||||||| || || || || || | || | ||||
Sbjct 3349 AGTCAGATACCATGGTGAGGAGAAAGCATGAAGACAGCTGAGGGCGTGTGGTTGCAGCTG 3290
Query 139805 CAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGA 139864
| || || || || || || ||||| | ||| ||| | ||| | ||| || || |
Sbjct 3289 CGAAAAGTGTTGGTGAGGCATGTGTGAAGAAGCGTTCCGAAAGCAAATTGTAAGTCTCCA 3230
Query 139865 TGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGA 139924
||| ||||||| ||| || ||||||| | |||||||||||||| || ||
Sbjct 3229 GTGCGGAATCAATATCATCTCCATGTATACCGATGGCAACTCGCATCAGCATGTGCTGTG 3170
Query 139925 TCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTA 139982
||||| || || ||| | ||||||| || ||| | || ||| | |||||| |
Sbjct 3169 GACGTTCAGCAACTTTGCCATTGATTTTTAACAAATACGATCG--CTCCAAAGTCTTGAA 3112
Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006
||||| || ||||| |||||
Sbjct 3111 TCCAAAATAATTATAGCCAAAATC 3088
>seq7704
Length=29863
Score = 138 bits (152), Expect = 1e-27
Identities = 159/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
||||||||||||||| ||||||| || || ||||| || || || || || || ||| |
Sbjct 18346 TACGATGCAGATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACC 18405
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
| || || | |||| || ||| ||||| || |||||||||||||| ||||| ||
Sbjct 18406 GTCGGATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGA 18465
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
||| || |||||||||||||| || || || |||| ||| | | | || |||||
Sbjct 18466 TCAGCAGCGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGATTA 18525
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||||||| || || || ||| | |||||||||
Sbjct 18526 CAACATTCAGAAAGAGTCAACATTGCACTTGGTG 18559
>seq42801
Length=1186
Score = 125 bits (138), Expect = 6e-24
Identities = 486/755 (64%), Gaps = 18/755 (2%)
Strand=Plus/Minus
Query 56014 TCGCCGTTATCGGCGTCGATTTCCCACGAAAAAACACCGTCCAAATCGTTGTCGATCACG 56073
|||||||| || |||||||| ||||| || || | ||| ||| | || || | ||||
Sbjct 759 TCGCCGTTGTCCGCGTCGATCTCCCAGGAGAATAGGCCGCCCAGCTGCTTATCCAACACG 700
Query 56074 TAACGGCATTTGTCGGCGACGGTTTCGACACTGTCAAAGGTTATCAAGTCGCCGGTGCTC 56133
|| || |||| | | | | || ||||||||| |||| ||||||||| |
Sbjct 699 TACTTGCCTTTGGCCTGCCCCGAGCGGGCATCGTCAAAGGTGATCAGATCGCCGGTGGTA 640
Query 56134 GCTTTAAAAACGTACGCCGCTTTGGCAGTTTCGTCGTACGTGTACTCGTAATTGGC---C 56190
| ||| || ||||| | ||||| || || ||||||| ||||||| | | | | |
Sbjct 639 GGTTTGAACACGTAAGGCGCTTCCGCCGTGGCGTCGTAGGTGTACTGCCACTCGCCGCTC 580
Query 56191 AGG---TTGTTATGAATTTGTCTATAGTCGACGACTCCGTCCTCCCATGTGCCGGACACG 56247
| | | | | || || | ||||| |||| |||| |||||| ||||| ||
Sbjct 579 ATGAACTGGCTGGCGATCTGGCGGTAGTCCACGATGCCGTTCTCCCAGGTGCCTTTGACC 520
Query 56248 GGCCCCGAAGCAGAGGCACCCACGAACGGATGATCTTTCGTGAAATTAGTCACTCCGGTC 56307
||||| | || | | || ||||||| | ||| | | |||| ||||||
Sbjct 519 GGCCCGGTGGCGGTG---CCGGTGAACGGAATGTTGTTCTGGTAGCCGTTCACCCCGGTC 463
Query 56308 CAACCTCTGCCGTACATGGCGACACCGAGCACTATCTTGTTCGGCTTTACGCCCTGCTGG 56367
||||| | ||| ||||||||| |||| || |||||| |||||| |||||||||
Sbjct 462 CAACCGCGGCCATACATGGCGGTGCCGACGACGATCTTGCCCGGCTTGACGCCCTGCGCC 403
Query 56368 AGGAGAGCGTGCACAGCGAAATCTGTCGTATAT-CGTTCTGCCTTGTTCCATTCGGGCGC 56426
|| || || | ||| || | || || || || | | | | |||| | |||||
Sbjct 402 AGCAGCGCATTCACGCCGTTCACCGTGGTGTAGGCGGTGTCCGGT-TTCCCGGCCGGCGC 344
Query 56427 GTAAACGTTCGTATGGTAGCCCAAATCCG--AGTTGGACCAAGCGCCTTTGAAATCGTAA 56484
| | || || | |||| | || | || | ||||| | ||| |||||
Sbjct 343 ATTCAGCGCGGTCTGATGCCCCAGGTTTTTCAGATCGA--AGGCGCCGTAGAAGTCGTAG 286
Query 56485 TTCATCAAAAATATTTTGTCAAGATACGTTTGCGCCTCGTCGTAATCGACGACGGCTATC 56544
|||||| || || | | | | | ||||| ||| ||| | || | | |||
Sbjct 285 CTCATCAGGAAGATGTGAACCATCGAGATCTGCGCGACGTTGTATGCCACCTTGTCGATC 226
Query 56545 TTATCGTATCCCGCGCTTATCGCGCTCGTGAGTTGGAATTTACGACCCGTTTCGATCTCC 56604
|| || | || ||||| || ||| || || | | || || || ||||| | |
Sbjct 225 TTGTCCTTGCCGGCGCTGATGGCGGAGGTCAGCTCATACTTGCGGCCGGTTTCCGCCGAC 166
Query 56605 AACTGGTCGAGCATATGTCTCAACTCCTTCAACAGAATCACATAAGTCGACCCGTCGTGT 56664
| ||| || ||||| | || || |||| ||| | ||||||||| |||||| ||
Sbjct 165 AGCTGATCCAGCATCGCCCGCAGTTCTTTCATCAGCAGCACATAAGTTTCCCCGTCCTGA 106
Query 56665 GCTGGATCACCTAACAGGGGATTGGCGCCTTTGCCACCCGGAAACTCCCAGTCGATGTCG 56724
| || | || | ||| |||||||||||||| ||||| || ||||||||||| ||
Sbjct 105 G--GGCTGCCCAGATTCGGG-TTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCC 49
Query 56725 ACTCCATCGAAGAATTTCCACGTTAGTAGAAACTC 56759
|| || |||||||| ||||| || | || |||||
Sbjct 48 ACGCCGTCGAAGAACTTCCAGGTCTGCAGGAACTC 14
>seq2274
Length=37031
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || ||||| ||||| || ||| ||||||| || || ||
Sbjct 30243 AAGATCCAGGACAAGGAGGGTATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAG 30302
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|||||||||||| | | | || || || ||||| || ||||| || || || |||
Sbjct 30303 CAGCTGGAGGATGGTCGCACTCTTTCTGACTACAACATCCAGAAGGAGTCAACCCTCCAC 30362
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|||||| | || |||| || ||
Sbjct 30363 TTGGTGCTCCGTCTGCGTGGTGG 30385
>seq355
Length=9390
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| | || || || || || || | ||||| ||| | ||
Sbjct 9203 ATGCAGATCTTTGTGAAAACATTGACTGGCAAGACCATCACTTTGGAAGTTGAACCTTCC 9262
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||||||||| || || || || || |||||
Sbjct 9263 GACACCATTGAGAATGTGAAGGCTAAAATCCAAGACAAGGAGGGTATCCCCCCAGATCAG 9322
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| ||| | || || ||||| || ||||||||||||
Sbjct 9323 CAGCGTCTCATTTTCGCCGGAAAGCAGCTGGAGGAT 9358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449627284650760
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