Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 134 1e-26
seq34587 109 5e-19
>seq42801
Length=1186
Score = 134 bits (148), Expect = 1e-26
Identities = 378/572 (66%), Gaps = 19/572 (3%)
Strand=Plus/Plus
Query 29210 CTCGGTCGAGGAATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGA 29269
|||||| | || || ||||| ||||| || || |||||||| || || ||||||||
Sbjct 4 CTCGGTGAAAGAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGA 63
Query 29270 ATTTCCGGGCGGTAAAGGCGCTAACCCGACACTTGGCAACGGGGAGCGCGACGCCGACAC 29329
||| |||||||| |||||||| ||||||| || |||| | || |||| || ||
Sbjct 64 ATTCCCGGGCGGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAG---GACGGGGAAAC 120
Query 29330 GTATAACATTTTACTGAAGGAATTGCGCGCAATGCTGGATAAACTGCAATTGCAAACGGG 29389
||| | | |||| ||| |||| || ||||||||| | ||| | |||| ||
Sbjct 121 TTATGTGCTGCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAACCGG 180
Query 29390 TAAAACGTATGAATTGACAAGCGCAATCAGCTCTGGCCACGACAAAATTGCTGTAGTGAA 29449
| |||||| |||| ||| |||||| | ||| | ||||| || | |||
Sbjct 181 CCGCAAGTATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGC 240
Query 29450 ATACGACGTTGTGCAAAAATTTCTTGATAAAATATTTCTAATGAGTTACGATTTTAAAGG 29509
|||| |||| | ||| | | | | | | || || || ||||| ||||| || | ||
Sbjct 241 ATACAACGTCGCGCAGATCTCGATGGTTCACATCTTCCTGATGAGCTACGACTTCTACGG 300
Query 29510 CGCAT--GGTC--AAACACCGATTTGGGATATCAAACTACACTCTACGCACCGAGTTGGA 29565
||| | | || ||| ||| |||| |||| || | || | || ||| |||
Sbjct 301 CGCCTTCGATCTGAAAAACC----TGGGGCATCAGACCGCGCTGAATGCGCCGGCCGGGA 356
Query 29566 ATCCCAACGAGCTTTACAACACTGACCACGCCGTAAAGTCGCTCACTAAC-CAAGGCGTG 29624
| || || |||| ||| | ||| ||| || |||| || | || |||||
Sbjct 357 AACCGGACACCGCCTACACCACGGTGAACGGCGTGAATGCGCT-GCTGGCGCAGGGCGTC 415
Query 29625 GACCCGCGCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACGGGCGTGACC 29684
| ||| |||| || | || ||| ||||||||| |||||||||||||| || |||| |
Sbjct 416 AAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGACCGGGGTGAAC 475
Query 29685 GGTTACGTCGGTGACAACTAT---TTTAAAGGCACAGCTGCCGGGCCCGTGACCGGCACT 29741
|| ||| | | ||||| | || | ||||| || ||||||| || | |||||
Sbjct 476 GGCTAC--CAG-AACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTCAAAGGCACC 532
Query 29742 TGGGATGACGGAGTTGTCGACTATCGTCAAAT 29773
||||| |||| | || ||||| || || ||
Sbjct 533 TGGGAGAACGGCATCGTGGACTACCGCCAGAT 564
>seq34587
Length=2265
Score = 109 bits (120), Expect = 5e-19
Identities = 107/136 (79%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
||||| |||||| || || |||| ||||| || |||||||| || || ||| | || ||
Sbjct 2132 ATCGAACTGCGTCTGGGCTCCCAATTCGCAACCAAAGTACTTGGTTGGATAAGTTGCTGG 2191
Query 34497 ACGTCCAA--GCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
||||||| |||| | || | ||||| ||||||||| | ||| ||||||||||||||
Sbjct 2192 GCGTCCAATGGCGCGT--GCTACTTCGGCCATGTTGACCAGGACGGTCTTGATGCCGTTA 2249
Query 34555 CCCTTTCCTTCGACCT 34570
||||| || |||||||
Sbjct 2250 CCCTTGCCCTCGACCT 2265
Score = 86.0 bits (94), Expect = 5e-12
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 34254 GCCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGAT 34313
||| || |||| ||||| ||||| || |||| | | || ||||| || ||| |
Sbjct 1872 GCCATGGAAACCACATGCCTTGCATGATTGCGAGATGGTTTGATTCTTAGCCGAAACGGT 1931
Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373
| | || || || || ||||| |||||||| | |||||||||||| ||||| |||||
Sbjct 1932 TAAGTTCGTTTCAGGATTATCACACTCCGGACAGAGCACAAACTTGCGAATGAAGCCATC 1991
Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||||| ||||| | ||| || || ||||| || || ||||| || |||||
Sbjct 1992 GAGCAGATCCTGCAGCTTGTTCACATCATGCGAGCCATTCACAATGAAACGCTCGTT 2048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412599750553031
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |