Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq27305 143 4e-28
seq19922 143 4e-28
seq1361 118 2e-20
seq1210 100 5e-15
>seq27305
Length=8087
Score = 143 bits (158), Expect = 4e-28
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||||||||||||||| || | ||||| || ||| | | || || || |
Sbjct 5303 GAGAAGCGCACCGACGACATAACGTCATGGGATGCGGACTTCCTCAAAGTTGATCAGGGC 5244
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| || || || ||||| || || ||||||||| | ||||| ||| ||| ||||| ||
Sbjct 5243 ACACTTTTCGAATTGATACTGGCGGCCAACTACTTGGACATTAAGGGCCTTCTCGAGCTG 5184
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
|||||||||||||||||| | ||||||| |||| | ||||||||||| ||||||||
Sbjct 5183 ACCTGCAAGACCGTGGCCAACATGATCAAGGACAAGACTCCCGAGGACATTCGCAAGACG 5124
Query 2035746 TTTAACATCAAG 2035757
|| |||||||||
Sbjct 5123 TTCAACATCAAG 5112
>seq19922
Length=1369
Score = 143 bits (158), Expect = 4e-28
Identities = 231/327 (71%), Gaps = 5/327 (2%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||||| || || ||| || |||||||| || || ||||||
Sbjct 1196 CCCTCGTCGCGGGAGATCAGCTCATTCGAGAAGGTAAGACCGGGCATAAGACCACGCTTC 1137
Query 794401 TTGAGCCAAAAGATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|| ||||| ||||| | | || |||||||| ||| |||||||| ||||| || |||||
Sbjct 1136 TTCAGCCAGAAGATCGACGCA-AAACTGCCGCTGAAGAAGATGCCTTCGACAGCAGCAAA 1078
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | | || |||||| |||| | || ||| || | |||||| || |||||
Sbjct 1077 GGCAATGATGCGCTCGCCAAAGTTTGCC--GCCTTCGAGGA-GATCCAAGACAGAGCCCA 1021
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579
|||||||| | |||| | ||||| ||| || ||||| ||||||| ||| ||
Sbjct 1020 ATCTGCCTTACGCTTCACAGCGGGCATCGTTTCAATGGCATTGAAGAGGTAGTCGCGCTG 961
Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639
||| ||| | ||| ||||||||||| | ||| | || ||||||| || ||
Sbjct 960 ATGCGGATCCCGAATGTAAGTGTCGATGAGCACGCTGTACATTTCCGAGTGGACATTCTC 901
Query 794640 GATGGCGATCTGGAAGCCATAAAAGCA 794666
||||| ||||||||||||||||||||
Sbjct 900 CATGGCAATCTGGAAGCCATAAAAGCA 874
>seq1361
Length=8679
Score = 118 bits (130), Expect = 2e-20
Identities = 345/523 (66%), Gaps = 14/523 (3%)
Strand=Plus/Minus
Query 2411460 GTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA-AAGGCAAAGATCT 2411518
||| |||||||| |||||||| | ||||| | | | || | |||| ||||||||
Sbjct 5699 GTGAATGCGCTTCTCGTAGCCCAACTGCGGCAAATACTT-CTCGGAGAAGGTAAAGATCT 5641
Query 2411519 TGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCT 2411578
||||||| || || || || || || ||||| | |||| || ||| || || |||
Sbjct 5640 TGCGCTGATCAACACCACCGAATTGTGCATCGACCTTCAGGTACTCCTCATCCAGACCCT 5581
Query 2411579 GCATGAGCGGG-TAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATCT---TGACCACC 2411634
||| || |||| |||| ||| |||| |||| | | |||| || ||||||||
Sbjct 5580 GCA-GACCGGGATAGAGTAGGCAAGAGAGCAGCGGAT---GCTCCACCTGCTTGACCACC 5525
Query 2411635 TGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCGTCAGGCGCAAGAGGT 2411692
| ||| |||| || | || | || | |||||| | | | || | | ||
Sbjct 5524 TCAGCGCCGGCTTTCTTGGCATCATGA--ATGGTCACCAGGGAGCTGAGCTTGTACACGT 5467
Query 2411693 CGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCA 2411752
| | ||||| | | |||||||||| ||||| || || | || ||||
Sbjct 5466 CCAATGTGTACTCCTTGGAGAGCTGGTAATCACTGCCCTTGACGAACTTCAGCTTGTCCA 5407
Query 2411753 GCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGT 2411812
|||| || |||||| || ||||| |||||||| || |||||| | | ||
Sbjct 5406 GCGGCACTCCAATGGATTGAAGCATCGCCTTGATCACATGCTCGTAGTACTGTGTGCGCA 5347
Query 2411813 GCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGA 2411872
||| | || ||| || | ||| || || | || ||| |||| ||||| || |
Sbjct 5346 GCTGCAGCAGCGACCAAGGAGCCTTCATGTTATCCAAGTAGGCATGCAGATCGGCGAACA 5287
Query 2411873 GGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGT 2411932
|||| | ||| |||||| |||| ||| |||||||| | || | |||||||||||||
Sbjct 5286 GGATGGTAACCTCACATCCTGCCTTGAGGAAGTCGGCAATCTTGGACATGGGCACAAAGT 5227
Query 2411933 AGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAAT 2411975
|| | | ||| || || ||||| | ||| |||||||| || ||
Sbjct 5226 AGGCGACATGTGGTTTCCCCGTTGTCGCTGTGCCCCAGTAGAT 5184
>seq1210
Length=4457
Score = 100 bits (110), Expect = 5e-15
Identities = 168/243 (69%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| || ||||| |||||||| || |||||| |||||| ||| || |||
Sbjct 4092 TGTACTTGGTAACAGCCTTAGTACCCTCACTAACTGCGTGCTTGGCCAATTCACCAGGCA 4151
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || || || || || || ||||| | || || ||||||||| |
Sbjct 4152 AGAGAAGACGTACAGCAGTTTGAATTTCGCGACTTGTAATTGTAGAGCGCTTGTTGTAGT 4211
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| || |||||| | | ||||| || | || ||||| ||||| |||||
Sbjct 4212 GAGCCAAACGCGAGGCCTCTGCAGCAATGCGCTCAAAAATATCGTTTACAAAGCTGTTCA 4271
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| || || ||||| || || || || ||||||||||||||||
Sbjct 4272 TGATACTCATCGCCTTAGATGAAATGCCAGTATCCGGATGAACTTGCTTGAGCACCTTGT 4331
Query 1485710 AAA 1485712
|||
Sbjct 4332 AAA 4334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7911133293976413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |