Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2274 114 8e-21
seq7704 107 1e-18
seq355 89.7 3e-13
seq42801 84.2 1e-11
>seq2274
Length=37031
Score = 114 bits (126), Expect = 8e-21
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 30370 AGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCC 30311
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || ||||||||||| || ||||| ||| | || | |||||||||||
Sbjct 30310 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCC 30251
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || || | ||| | ||| || || | ||| ||||
Sbjct 30250 TGGATCTTGGCCTTGAC--ATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGG 30193
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || | |||||| || || ||||||||
Sbjct 30192 TCTTGCCAGTCAAGGTCTTGACGAAAATCTGCAT 30159
>seq7704
Length=29863
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|| |||| ||| |||| || ||| ||||||||||| || || || || |||| ||||
Sbjct 18561 AGCACCAAGTGCAATGTTGA-CTCTTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCATC 18503
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| |||||| || || ||||||| || ||||| ||| | || | || || |||||
Sbjct 18502 TTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCCTTCTTTGTC 18443
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | | || | || | ||||| |||| || |||||
Sbjct 18442 CTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGT 18383
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||||||||||| || || |||||||||||
Sbjct 18382 CTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
>seq355
Length=9390
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/190 (71%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849
||||| ||||| |||||||| || | || |||| ||||| |||||||||||||| ||
Sbjct 9390 TTCTGGATGTTGTAGTCCGACAGAGTACGGCCATCCTCCAGCTGCTTTCCGGCGAAAATG 9331
Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909
|| || ||||| ||| | || | ||||||||||| | ||||| || || || ||
Sbjct 9330 AGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCTTGGATTTTAGCCTTCAC--ATTCT 9273
Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
|| | || | || || || | || |||||||| || || | || || ||||
Sbjct 9272 CAATGGTGTCGGAAGGTTCAACTTCCAAAGTGATGGTCTTGCCAGTCAATGTTTTCACAA 9213
Query 34968 AGATCTGCAT 34977
||||||||||
Sbjct 9212 AGATCTGCAT 9203
>seq42801
Length=1186
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 6034 TTGGCACCCTTTCCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAG 6093
||||| || || || ||||| || ||||||||||| ||||| ||||| ||||||||||||
Sbjct 87 TTGGCGCCTTTGCCGCCCGGGAATTCCCAGTCGATATCCACGCCGTCGAAGAACTTCCAG 28
Query 6094 GTCTCCAGAAACTC 6107
|||| ||| |||||
Sbjct 27 GTCTGCAGGAACTC 14
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325502003763473
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |