Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq10407 520 2e-143 seq47809 154 3e-33 >seq10407 Length=511 Score = 520 bits (576), Expect = 2e-143 Identities = 374/431 (87%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 24565 GAGGACTTTTACATGATAAAGCAAATGCGCCAGCAGGGCGCGTACATCGTCGATATTGCG 24624 |||||||||||||||||||||||||||||||||||||| ||||| || || |||||||| Sbjct 76 GAGGACTTTTACATGATAAAGCAAATGCGCCAGCAGGGTGCGTATATTGTTGATATTGCC 135 Query 24625 ACTCAGATTGGTTGCTCTGAACGGACGGTCAGACGCTACCTCAAATACCCTGAACCGCCA 24684 |||||| ||||||||||||| ||||| |||||||| ||||| |||||||| ||||| || Sbjct 136 ACTCAGGTTGGTTGCTCTGAGCGGACTGTCAGACGGTACCTGAAATACCCGGAACCTCCG 195 Query 24685 GCCAGAAAGACCCGCCACAAAATGGTTAAGCTGAAACCGTTTATGGATTACATCGACATG 24744 |||||||| || ||||||||||||| || || | ||||| ||||| || ||||||||| Sbjct 196 GCCAGAAAAACACGCCACAAAATGGCCAAACTCAGGCCGTTCATGGACTATATCGACATG 255 Query 24745 CGCCTGGCAGAGAATGTCTGGAATAGCGAGGTTATCTTCGCGGAGATTAAGGCAATGGGT 24804 || ||||| |||||||||||||| |||||| ||| ||||||| || || || |||||| Sbjct 256 CGTCTGGCTGAGAATGTCTGGAACGGCGAGGGCATCCTCGCGGAAATCAAAGCGATGGGT 315 Query 24805 TATACGGGCGGACGTTCCATGCTGCGTTACTACATCCAGCCCAAACGTAAAATGCGTCCG 24864 ||||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||| || Sbjct 316 TATACCGGCGGACGCTCCATGTTGCGTTACTACATCCAGCCAAAACGTAAGATGCGGCCA 375 Query 24865 TCAAAAAGAACAGTTCGCTTCGAAACTCAGCCTGGATACCAGCTCCAGCATGACTGGGGC 24924 || || | ||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 376 TCGAAGAAAACGGTTCGCTTCGAAACTCAGCCCGGTTACCAGCTCCAGCATGACTGGGGA 435 Query 24925 GAAGTTGAGGTGGAGGTTGCCGGGCAACGGTGCAAAGTTAACTTTGCGGTTAATACGCTG 24984 |||||||||| |||||||||||||||||| |||| |||||||| |||||||| |||||| Sbjct 436 GAAGTTGAGGCGGAGGTTGCCGGGCAACGATGCAGGGTTAACTTCGCGGTTAACACGCTG 495 Query 24985 GGGTTCTCCCG 24995 |||| ||| || Sbjct 496 GGGTCCTCACG 506 >seq47809 Length=786 Score = 154 bits (170), Expect = 3e-33 Identities = 139/175 (79%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 10489 CTCGCTGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTC 10548 || || || |||||||| || ||||||||||||||||||||||| |||| || || || Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69 Query 10549 GCCCGTACCCTGACGCTGGAATCTGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 10608 ||||| || || |||||||||| ||||| ||||||||||| || | ||||||||||| Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129 Query 10609 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGG 10663 || || || | | || ||||| |||||||| || ||| ||| |||||||||| Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGG 184 Score = 111 bits (122), Expect = 3e-20 Identities = 250/373 (67%), Gaps = 2/373 (1%) Strand=Plus/Plus Query 10911 TCCGGCCTGCGTCACCATCTCTGTGCTGTCACGTGAAAATAACGGTGTCGCATCCGAAGA 10970 ||||||| ||| ||||| || ||| |||| ||| ||||| ||| || || Sbjct 351 TCCGGCCAACGTGCTGATCTCCGTACTGACACGCGAAGGAGACGGTACCGCCAGCGCCGA 410 Query 10971 CCTGCTGGCGGTGGTGCGTAACGCCCTTAATGGCGAGGACGTCAGGCCGGTGGCCGACCG 11030 ||| |||| | || ||| || | || | || || | | ||||||||||| || Sbjct 411 ACTGGCGGCGATCGTCGATAAAGCGTTGAACGATGAAGATGAGCGCCCGGTGGCCGATCG 470 Query 11031 CGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCCACGCTTTACCTTTA 11090 ||| ||||| | |||||| |||| | ||| | || | ||| || ||||| || Sbjct 471 CGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCCGTACTGTACCTCTA 530 Query 11091 CCCTGGTCCCGAAAGCGAACCCATCCG-CGCTGCTGCCGTGAAAAAACTGGAAGCGTACA 11149 |||||| || ||| ||||| | || ||| ||||||| |||||| || |||| Sbjct 531 CCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAAACTGAAAAATTACA 589 Query 11150 TCACAGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCATTTATGCTGCTTTGC 11209 ||| || |||||||| | || || ||||| || |||| || || || || || ||| Sbjct 590 TCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAATCTACGCCGCACTGC 649 Query 11210 ATGTGGAAGGCGTGCAGCGTGTCGAACTGGCCGCACCACTGGCCGACATCGTACTCAACA 11269 ||| ||||| ||||| || || ||| || | || | ||||||||||| | | ||| Sbjct 650 ATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCCGACATCGAATTGGACA 709 Query 11270 GTACGCAGGCGTC 11282 | |||||||| Sbjct 710 CAGCACAGGCGTC 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107426646319860