Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_022750.1
Length=33628
Score E
Sequences producing significant alignments: (Bits) Value
seq10407 520 2e-143
seq47809 154 3e-33
>seq10407
Length=511
Score = 520 bits (576), Expect = 2e-143
Identities = 374/431 (87%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 24565 GAGGACTTTTACATGATAAAGCAAATGCGCCAGCAGGGCGCGTACATCGTCGATATTGCG 24624
|||||||||||||||||||||||||||||||||||||| ||||| || || ||||||||
Sbjct 76 GAGGACTTTTACATGATAAAGCAAATGCGCCAGCAGGGTGCGTATATTGTTGATATTGCC 135
Query 24625 ACTCAGATTGGTTGCTCTGAACGGACGGTCAGACGCTACCTCAAATACCCTGAACCGCCA 24684
|||||| ||||||||||||| ||||| |||||||| ||||| |||||||| ||||| ||
Sbjct 136 ACTCAGGTTGGTTGCTCTGAGCGGACTGTCAGACGGTACCTGAAATACCCGGAACCTCCG 195
Query 24685 GCCAGAAAGACCCGCCACAAAATGGTTAAGCTGAAACCGTTTATGGATTACATCGACATG 24744
|||||||| || ||||||||||||| || || | ||||| ||||| || |||||||||
Sbjct 196 GCCAGAAAAACACGCCACAAAATGGCCAAACTCAGGCCGTTCATGGACTATATCGACATG 255
Query 24745 CGCCTGGCAGAGAATGTCTGGAATAGCGAGGTTATCTTCGCGGAGATTAAGGCAATGGGT 24804
|| ||||| |||||||||||||| |||||| ||| ||||||| || || || ||||||
Sbjct 256 CGTCTGGCTGAGAATGTCTGGAACGGCGAGGGCATCCTCGCGGAAATCAAAGCGATGGGT 315
Query 24805 TATACGGGCGGACGTTCCATGCTGCGTTACTACATCCAGCCCAAACGTAAAATGCGTCCG 24864
||||| |||||||| |||||| ||||||||||||||||||| |||||||| ||||| ||
Sbjct 316 TATACCGGCGGACGCTCCATGTTGCGTTACTACATCCAGCCAAAACGTAAGATGCGGCCA 375
Query 24865 TCAAAAAGAACAGTTCGCTTCGAAACTCAGCCTGGATACCAGCTCCAGCATGACTGGGGC 24924
|| || | ||| |||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 376 TCGAAGAAAACGGTTCGCTTCGAAACTCAGCCCGGTTACCAGCTCCAGCATGACTGGGGA 435
Query 24925 GAAGTTGAGGTGGAGGTTGCCGGGCAACGGTGCAAAGTTAACTTTGCGGTTAATACGCTG 24984
|||||||||| |||||||||||||||||| |||| |||||||| |||||||| ||||||
Sbjct 436 GAAGTTGAGGCGGAGGTTGCCGGGCAACGATGCAGGGTTAACTTCGCGGTTAACACGCTG 495
Query 24985 GGGTTCTCCCG 24995
|||| ||| ||
Sbjct 496 GGGTCCTCACG 506
>seq47809
Length=786
Score = 154 bits (170), Expect = 3e-33
Identities = 139/175 (79%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 10489 CTCGCTGAACGCAAGGCGACACTGATTTCCCTTTACCCGGAAGACCAGCAGGAGGCGGTC 10548
|| || || |||||||| || ||||||||||||||||||||||| |||| || || ||
Sbjct 10 CTGGCCGATCGCAAGGCCACGCTGATTTCCCTTTACCCGGAAGAGCAGCGCGAAGCCATC 69
Query 10549 GCCCGTACCCTGACGCTGGAATCTGAGCCTCTCGTCAAACTGCTGGAGGAAAATGCTTAT 10608
||||| || || |||||||||| ||||| ||||||||||| || | |||||||||||
Sbjct 70 GCCCGCACATTGGCGCTGGAATCGGAGCCGATCGTCAAACTGTTGCAAGAAAATGCTTAC 129
Query 10609 CGTGAGCTTATCTGGCGTCAGCGTGTGAATGAGGCTGCACGGGCGGTGATGCTGG 10663
|| || || | | || ||||| |||||||| || ||| ||| ||||||||||
Sbjct 130 CGCGAACTGCTGTTACGCCAGCGCGTGAATGAAGCCGCAAAGGCCGTGATGCTGG 184
Score = 111 bits (122), Expect = 3e-20
Identities = 250/373 (67%), Gaps = 2/373 (1%)
Strand=Plus/Plus
Query 10911 TCCGGCCTGCGTCACCATCTCTGTGCTGTCACGTGAAAATAACGGTGTCGCATCCGAAGA 10970
||||||| ||| ||||| || ||| |||| ||| ||||| ||| || ||
Sbjct 351 TCCGGCCAACGTGCTGATCTCCGTACTGACACGCGAAGGAGACGGTACCGCCAGCGCCGA 410
Query 10971 CCTGCTGGCGGTGGTGCGTAACGCCCTTAATGGCGAGGACGTCAGGCCGGTGGCCGACCG 11030
||| |||| | || ||| || | || | || || | | ||||||||||| ||
Sbjct 411 ACTGGCGGCGATCGTCGATAAAGCGTTGAACGATGAAGATGAGCGCCCGGTGGCCGATCG 470
Query 11031 CGTGACCGTGCAGTCTGCCGCCATCGTTGAATACCAGATAAACGCCACGCTTTACCTTTA 11090
||| ||||| | |||||| |||| | ||| | || | ||| || ||||| ||
Sbjct 471 CGTCACCGTCCGCTCTGCCAACATCATCAGCTACAACATCGATGCCGTACTGTACCTCTA 530
Query 11091 CCCTGGTCCCGAAAGCGAACCCATCCG-CGCTGCTGCCGTGAAAAAACTGGAAGCGTACA 11149
|||||| || ||| ||||| | || ||| ||||||| |||||| || ||||
Sbjct 531 CCCTGGCCCTGAAGCAGAACCGGTGCGTCGC-GCTGCCGAAGCCAAACTGAAAAATTACA 589
Query 11150 TCACAGCACAGCACCGGCTGGGGCGCGACATCCGTCTGTCTGCCATTTATGCTGCTTTGC 11209
||| || |||||||| | || || ||||| || |||| || || || || || |||
Sbjct 590 TCAGCGCCCAGCACCGTTTAGGCCGTGACATTCGCTTGTCGGCAATCTACGCCGCACTGC 649
Query 11210 ATGTGGAAGGCGTGCAGCGTGTCGAACTGGCCGCACCACTGGCCGACATCGTACTCAACA 11269
||| ||||| ||||| || || ||| || | || | ||||||||||| | | |||
Sbjct 650 ATGCCGAAGGGGTGCAACGCGTTGAATTGAAGACCCCGCAGGCCGACATCGAATTGGACA 709
Query 11270 GTACGCAGGCGTC 11282
| ||||||||
Sbjct 710 CAGCACAGGCGTC 722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107426646319860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |