Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq42801 156 3e-33
>seq42801
Length=1186
Score = 156 bits (172), Expect = 3e-33
Identities = 508/777 (65%), Gaps = 43/777 (6%)
Strand=Plus/Plus
Query 29474 CTCGGTCAGAGAATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGA 29533
|||||| | ||| || |||||| |||||||| || ||||||||||| || ||||||||
Sbjct 4 CTCGGTGAAAGAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGA 63
Query 29534 GTTTCCGGGTGGCAAAGGCGCCAACCCGACACTTGGCAACGGGGAGCGCGACGCCGACAC 29593
|| ||||| ||||||||||||||||||| || |||| | || |||| || ||
Sbjct 64 ATTCCCGGGCGGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAG---GACGGGGAAAC 120
Query 29594 GTATAACATTTTACTAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGG 29653
||| | | | || ||| |||| || ||| |||| || | | |||| ||
Sbjct 121 TTATGTGCTGCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAACCGG 180
Query 29654 CAAAACGTACGAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAA 29713
| | ||| ||| |||| ||| ||||| |||| | |||||||| | ||
Sbjct 181 CCGCAAGTATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGC 240
Query 29714 ATACGACGCTGCGCAAAAGTTTCTCGA----TAAAATATTCCTCATGAGCTACGATTTTA 29769
|||| ||| ||||| | |||||| | | || ||||| ||||||||||| ||
Sbjct 241 ATACAACGTCGCGCAGA----TCTCGATGGTTCACATCTTCCTGATGAGCTACGACTTCT 296
Query 29770 AAGGCGCGT--GGTC--AAACACCGATTTGGGCTACCAAACTACTCTCTACGCGCCGAGT 29825
| ||||| | | || ||| ||| |||| | || || | || | ||||||
Sbjct 297 ACGGCGCCTTCGATCTGAAAAACC----TGGGGCATCAGACCGCGCTGAATGCGCCGGCC 352
Query 29826 TGGAACCCAAACGAACTG--TACAACACGGACCACGCCGTTAA---GTTGCTCACGAACC 29880
|||| || || || | |||| ||||| ||| ||| || | |||| || |
Sbjct 353 GGGAAACCGGAC--ACCGCCTACACCACGGTGAACGGCGTGAATGCGCTGCTGGCG---C 407
Query 29881 AGGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAG 29940
||||||| | ||| |||| || | || ||| ||||||||| |||||||||||||| |
Sbjct 408 AGGGCGTCAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGACCG 467
Query 29941 GCGTGTCGGGTTATGACGGTGACAACTAT---TTTACGGGCACAGCTGCTGGGCCCGTGA 29997
| ||| || | || ||||| | || || ||||| || | ||||| || |
Sbjct 468 GGGTGAACGGCT---ACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTCA 524
Query 29998 CCGGCACTTGGGAAGACGGCGTTGTCGACTATCGCCAAATTGAAAACGA---AATGA--- 30051
||||| ||||| ||||| | || ||||| ||||| || | | | | ||||
Sbjct 525 AAGGCACCTGGGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGCG 584
Query 30052 ACAAGTACATTTACAAATTTGACACGGCCGCTAAAGCAGCTTACGTTTTCAATAAAGACA 30111
| ||| |||| | ||| | | || |||| ||||||| ||||| ||
Sbjct 585 GCGAGTGGCAGTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGTTCAAACCTACCA 644
Query 30112 AGGGCGATTTAATCTCATTTGACAGTGTCGATTCTGTATTGGCAAAAAACAGCTACGTAG 30171
|||||| | ||| | |||||| || | || | ||| ||| || ||||| |
Sbjct 645 CCGGCGATCTGATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGT-G 703
Query 30172 ATCGAAACGGA-TTGGGCGGATTATTCGCTTGGGAAATTGACGCCGACAACGGCGAT 30227
| || | | | ||||||| ||||| | ||||| || ||||| ||||||||||||
Sbjct 704 TTGGATAAGCAGCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGAT 760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398643131364163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |