Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq42801 156 3e-33 >seq42801 Length=1186 Score = 156 bits (172), Expect = 3e-33 Identities = 508/777 (65%), Gaps = 43/777 (6%) Strand=Plus/Plus Query 29474 CTCGGTCAGAGAATTTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGA 29533 |||||| | ||| || |||||| |||||||| || ||||||||||| || |||||||| Sbjct 4 CTCGGTGAAAGAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTGGGA 63 Query 29534 GTTTCCGGGTGGCAAAGGCGCCAACCCGACACTTGGCAACGGGGAGCGCGACGCCGACAC 29593 || ||||| ||||||||||||||||||| || |||| | || |||| || || Sbjct 64 ATTCCCGGGCGGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAG---GACGGGGAAAC 120 Query 29594 GTATAACATTTTACTAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGG 29653 ||| | | | || ||| |||| || ||| |||| || | | |||| || Sbjct 121 TTATGTGCTGCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAACCGG 180 Query 29654 CAAAACGTACGAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAA 29713 | | ||| ||| |||| ||| ||||| |||| | |||||||| | || Sbjct 181 CCGCAAGTATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAGGTGGC 240 Query 29714 ATACGACGCTGCGCAAAAGTTTCTCGA----TAAAATATTCCTCATGAGCTACGATTTTA 29769 |||| ||| ||||| | |||||| | | || ||||| ||||||||||| || Sbjct 241 ATACAACGTCGCGCAGA----TCTCGATGGTTCACATCTTCCTGATGAGCTACGACTTCT 296 Query 29770 AAGGCGCGT--GGTC--AAACACCGATTTGGGCTACCAAACTACTCTCTACGCGCCGAGT 29825 | ||||| | | || ||| ||| |||| | || || | || | |||||| Sbjct 297 ACGGCGCCTTCGATCTGAAAAACC----TGGGGCATCAGACCGCGCTGAATGCGCCGGCC 352 Query 29826 TGGAACCCAAACGAACTG--TACAACACGGACCACGCCGTTAA---GTTGCTCACGAACC 29880 |||| || || || | |||| ||||| ||| ||| || | |||| || | Sbjct 353 GGGAAACCGGAC--ACCGCCTACACCACGGTGAACGGCGTGAATGCGCTGCTGGCG---C 407 Query 29881 AGGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAG 29940 ||||||| | ||| |||| || | || ||| ||||||||| |||||||||||||| | Sbjct 408 AGGGCGTCAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGACCG 467 Query 29941 GCGTGTCGGGTTATGACGGTGACAACTAT---TTTACGGGCACAGCTGCTGGGCCCGTGA 29997 | ||| || | || ||||| | || || ||||| || | ||||| || | Sbjct 468 GGGTGAACGGCT---ACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTCA 524 Query 29998 CCGGCACTTGGGAAGACGGCGTTGTCGACTATCGCCAAATTGAAAACGA---AATGA--- 30051 ||||| ||||| ||||| | || ||||| ||||| || | | | | |||| Sbjct 525 AAGGCACCTGGGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGCG 584 Query 30052 ACAAGTACATTTACAAATTTGACACGGCCGCTAAAGCAGCTTACGTTTTCAATAAAGACA 30111 | ||| |||| | ||| | | || |||| ||||||| ||||| || Sbjct 585 GCGAGTGGCAGTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGTTCAAACCTACCA 644 Query 30112 AGGGCGATTTAATCTCATTTGACAGTGTCGATTCTGTATTGGCAAAAAACAGCTACGTAG 30171 |||||| | ||| | |||||| || | || | ||| ||| || ||||| | Sbjct 645 CCGGCGATCTGATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGT-G 703 Query 30172 ATCGAAACGGA-TTGGGCGGATTATTCGCTTGGGAAATTGACGCCGACAACGGCGAT 30227 | || | | | ||||||| ||||| | ||||| || ||||| |||||||||||| Sbjct 704 TTGGATAAGCAGCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGAT 760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398643131364163