Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_023610.1
Length=218339
Score E
Sequences producing significant alignments: (Bits) Value
seq44159 230 3e-55
>seq44159
Length=807
Score = 230 bits (254), Expect = 3e-55
Identities = 336/478 (70%), Gaps = 53/478 (11%)
Strand=Plus/Plus
Query 87448 TCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGG 87507
|| ||||| | |||||| |||||||| || || |||||||| || ||||| || ||||||
Sbjct 333 TCGCACTGGGTCACGTCGCCGTTAACGATAACCGTCACGTTTTCCCCCAGGCGGGTCAGG 392
Query 87508 AACATTTTCATCTG--TGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGT 87565
|||||||||||||| || | ||| |||||||||||||| ||||||||||| ||||| |
Sbjct 393 AACATTTTCATCTGGCTGGC--GGTCACGTTCTGGGCTTCATCCAGGATAACGACCGCAT 450
Query 87566 TCTCAAACGTGCGGCCACGCATATAC---------------------------------- 87591
| || || ||||| || ||||||||
Sbjct 451 TTTCGAAGGTGCGTCCGCGCATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 510
Query 87592 GCGAAGGGAGCAATTTCCACCTTCTTCACATCCGGGCGCAAGCAGTACTG----AAGGAA 87647
||||| || ||||| || ||||| | |||||||||| ||||||||| ||||||
Sbjct 511 GCGAACGGCGCAATCTCTACCTTGCCGATTTCCGGGCGCAGGCAGTACTGCAAAAAGGAA 570
Query 87648 CGTACCACCAAGGCGTTTCTCCAGGATGTCTTGAACCGGGCGGAAATACGGGGCGAATTT 87707
| | | | | ||| |||| ||||| | |||||||||||||| |||||||| ||
Sbjct 571 GATCCTAA-ACGACGTA---CCAGAATGTCATACACCGGGCGGAAATAAGGGGCGAACTT 626
Query 87708 CTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTCTCACCGGACTCTAAGACAGGACGCGT 87767
|||| ||| ||||| |||||||| || |||| ||| | | || || |||||||| ||
Sbjct 627 CTCGGAGATATCCCCCGGCAAGAAACCGAGGTCTTCATCCGCCTGCAAAACAGGACGGGT 686
Query 87768 CACGATGATGCGCTCCACCTCTTTATCCAGCAATGCTTTGGCCGCGT--GCGCAGTTGAC 87825
||||| || || ||||||||||||| | || || | ||||| | ||| | ||
Sbjct 687 AACGATAATCCGATCCACCTCTTTATGGATCAGCGCCTCCGCCGCCTTGGCGGCGCTG-- 744
Query 87826 AGGAATGTTTTACCACAACCGGCTTCACCCGTTGCAAAGATTAATTGCTTCGTGTTCA 87883
| ||||||||| |||| |||||||| || || || ||||| | ||| ||| ||||
Sbjct 745 ATGAATGTTTTGCCACCGCCGGCTTCGCCGGTGGCGAAGATCA---GCTGCGTATTCA 799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 698137080878680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |