Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq47487 114 1e-20 >seq47487 Length=501 Score = 114 bits (126), Expect = 1e-20 Identities = 296/444 (67%), Gaps = 13/444 (3%) Strand=Plus/Minus Query 123431 GTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCACCGGGGCCAGTTCTGGATTG 123490 || |||||||| || |||| |||||| ||||||| |||||| || | | |||| | Sbjct 476 GTCGGCAGGGCGATTTCCAGACACAGGCTGGACTGGCGCACCGGCGCGATCTGCGGATCG 417 Query 123491 AACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAGATGCGTCCTGTCTGACTG 123550 |||||||||| ||||||||||||||| |||| ||| || ||||| || || || | Sbjct 416 AACGGGCTGTGGGTGTTGCAGTGGTCGACGTTCTGGATATAGATACGGCCGGTAGAGGCG 357 Query 123551 CGCTCCTGCATAGCCACGGAGAAGGCTTCTGCTGCGGAGATGCTTTTCTTAGCCACTTCC 123610 || || ||||| || ||||| || | || | || ||| | || | | | Sbjct 356 CGTTCTTGCATCATCAGCGAGAACAGCTCAACCGCTTTCACGCGCTTC-TGGCGAATGCT 298 Query 123611 GGATCGGCT---TCCAACTTCTCGTACAACTCTTCAAATTTCTTCTGGTCGGAGAAGAAA 123667 | ||| || || ||| ||||| || |||| | ||| |||| |||||| Sbjct 297 G--TCGTCTTTCTCGTACTGGGTGTACAGGCGCTCGAATTCGTCCTGATCGGCGAAGAAC 240 Query 123668 TACTCGTAC-AGCTTGCCACCTGCAACGTTCGGGTGGAACAGAGTGATAT-TTCGCCCAT 123725 || ||| | | | ||| | || |||| |||||| ||||| | |||||| | Sbjct 239 GCGTCATACAACCCCGGCACGT----CGGACGGGCTGAACAGGGTGATGTCTTCGCCTTT 184 Query 123726 GTTGCAGACGTGCATACAGCATTTTGTTGATTTGCAGGCCGTAGTCAACGTGACGAGCAC 123785 | | ||| || |||| || ||| | |||| ||||||||| | ||| || | | Sbjct 183 GAT-CAGGCGCTGGTACATCAGACGGTTCAACTGCACGCCGTAGTCCATGTGGCGCACGC 125 Query 123786 GGGTGCTCTCTGTGCCACGGTTGTTCTTCATCACGATCAGGTTTTCGAAATCCCAGTGCC 123845 || ||| || ||| |||||||| |||| ||| | |||| |||| | ||| ||||| Sbjct 124 GGTTGCCTTCAACGCCGCGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGGTGCC 65 Query 123846 ACATAGGGTAGAAGTAAGTTGCCG 123869 |||| |||||||| ||||||| Sbjct 64 ACATCGGGTAGAACAGGGTTGCCG 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485736775670880