Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 230 2e-55
seq42801 196 5e-45
seq2274 127 2e-24
>seq2144
Length=13752
Score = 230 bits (254), Expect = 2e-55
Identities = 765/1168 (65%), Gaps = 59/1168 (5%)
Strand=Plus/Minus
Query 148046 ATTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCG 148105
|||||| || || || || |||||||| || ||||| || || ||||||| || || |
Sbjct 4797 ATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATT-GTGG 4739
Query 148106 -CTTTATCTTCATCTCCCAGGCCGTCTTGTACAGC---CGCTTGATATGATCGGGAATGC 148161
||||| || ||||| | ||||| || || ||| | ||| ||||||
Sbjct 4738 ACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCACATTTTGA---GGAATGT 4682
Query 148162 CGTCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGT 148221
|||||| || | ||||| || || | || ||||| ||| || ||
Sbjct 4681 TTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTTCATATCATCATCCC 4622
Query 148222 ATAGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGG 148281
| | || || ||| | || ||| | || || |||||||| ||||||||||| || |
Sbjct 4621 ACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAG 4562
Query 148282 CGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCA 148341
||||| || | || | ||| || | ||||| || || || || || ||||
Sbjct 4561 ACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCA 4502
Query 148342 AAATCTGCGCGGTCGTTGCCGTGGGCAT--GTACGCTACCAGCAGCGAGTTGCGCAAACC 148399
||||| || |||| |||||| ||||| || || || ||||| || || |||| ||
Sbjct 4501 TTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATA--AGCAGAGAATTACGCACTCC 4444
Query 148400 GCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTT 148459
| | || |||| || ||| || ||||||||||||||| | ||| | ||
Sbjct 4443 GTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATT 4384
Query 148460 CCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGG 148519
|||||| || ||||| ||||| || |||| | || || ||||| || | ||||
Sbjct 4383 CCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATAGGTCTCATACGT 4324
Query 148520 TCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGC 148579
|| | | | ||||| || ||||| || || | ||||| |||||||| || |||
Sbjct 4323 GCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCG-- 4266
Query 148580 AATTTGCCTGTTG----AGCAGCGCCGCCGACTCGCTTTCGTACGGCATA-CGCAGCCGC 148634
||| | |||||| || || |||| || || || || || ||| ||||
Sbjct 4265 AATAT--CTGTTGATTCAGAAGACACGCCTTATCACTCTCATA-GGGATACCGCATTAAA 4209
Query 148635 ACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGA- 148693
| || || || ||||| || || || || | ||||| || || ||| | | ||||||
Sbjct 4208 ATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGAT 4149
Query 148694 ----GAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTG 148748
|| | || || || || |||| ||| |||||||||||| ||||| ||
Sbjct 4148 TTCTTAGCCTCGGGC-----AGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTT 4094
Query 148749 CGCACCACCACCTTTGT-AATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGAT 148807
| || | ||| || | ||| | ||| |||| |||||| ||| ||| || |
Sbjct 4093 TG-GTAACAATCTTGGTGACCTCTTTG-AGCTTCACAAAGTCGTAC--GTCTTCTCCGGT 4038
Query 148808 GCATCG-----GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCG 148862
| || || | || || || || | |||||| || || ||||||| || ||
Sbjct 4037 GTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCA 3978
Query 148863 CTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGA 148922
||||| || || || | ||||| || |||||||| || |||||| || | |||
Sbjct 3977 GAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGG 3918
Query 148923 TTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGC 148982
|||||||||| ||| |||| |||||| | |||||||||||| |||||| ||||| ||
Sbjct 3917 TTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGT 3858
Query 148983 GTTTCCACTATG---AACCGATGCAGGTCCTGCGCGCGCACTTGCT-GCTCG--TAG--C 149034
| || | ||| |||| | ||| || || |||| | | || | | |
Sbjct 3857 GACTCAATGATGGCAAACCAA---AGGGATTGAGC-----CTTGATAACACGATTTGCTC 3806
Query 149035 GACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGA 149094
||||||||| ||||||| ||||| ||| ||| ||| || || | ||| |||
Sbjct 3805 GACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGA 3746
Query 149095 GACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCA 149154
| || || ||||||||||||||||| || ||||| | | | || | |||||||||||
Sbjct 3745 GTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCA 3686
Query 149155 TAAACAGATCGGGCACCCAGAGCGCGTA 149182
|||||| ||| || | ||| || || ||
Sbjct 3685 TAAACAAATCTGGTATCCACAGGGCATA 3658
>seq42801
Length=1186
Score = 196 bits (216), Expect = 5e-45
Identities = 529/796 (66%), Gaps = 39/796 (5%)
Strand=Plus/Plus
Query 25198 CGACTCGGTGCAAGAGTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTG 25257
|| ||||||| |||||| ||| |||||||||||||| |||||||| || |||| ||
Sbjct 1 CGGCTCGGTGAAAGAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTG 60
Query 25258 GGAGTTTCCCGGCGGCAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGC 25317
||| || || |||||||| |||||||||||| | |||||| | | || || | |
Sbjct 61 GGAATTCCCGGGCGGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAGGACG---GGGA 117
Query 25318 CACCTACACTACCCTGTTGGCGGAGCTGCGCGCGATGCTCGACGCGCT--CGGTGCCCAC 25375
|| || ||| || || ||||| |||||||| || ||| ||| | ||
Sbjct 118 AACTTATGTGCTGCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAAC 177
Query 25376 CAAAACCGCCACTACCTGCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTC 25435
| |||| | || ||| || ||| || ||||| ||||| |||||||||| |
Sbjct 178 CGG--CCGCAAGTATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAG 235
Query 25436 GTCGACTACACTGAGGCGCAAAAGTATCTCGAT----CTGATATTCCTCATGTCGTACGA 25491
|| | |||| | ||||| | ||||||| | || ||||| ||| |||||
Sbjct 236 GTGGCATACAACGTCGCGCAGA----TCTCGATGGTTCACATCTTCCTGATGAGCTACGA 291
Query 25492 TTTTAAGGGCGGCTGGTCGCTC--AACGAGCTCGGTCATCAGACGGCGCTTTACGCGCCC 25549
|| | |||| || ||| || || | || || |||||||| ||||| | |||||
Sbjct 292 CTTCTACGGCGCCT--TCGATCTGAAAAACCTGGGGCATCAGACCGCGCTGAATGCGCCG 349
Query 25550 CCGTGGCGGCCCGACGAACCG--TACTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGC 25607
| || || ||| |||| ||| | ||| || || | |||||||| ||||
Sbjct 350 GCCGGGAAACCGGAC--ACCGCCTACACCACGGTGAACGGCGTGAATGCGCTGCTGGCGC 407
Query 25608 AACACGTGCCCAAGAA---CAAGATTGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGA 25664
| ||| |||| |||||| || | ||| |||||||| |||||||| ||||
Sbjct 408 AGGGCGT---CAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGA 464
Query 25665 CGGGCGT-AGCGAGCGACGACAGCGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTC 25723
| || || | || || || | | | ||| ||| ||| |||||||||||||| || |||
Sbjct 465 CCGGGGTGAACG-GCTACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTC 523
Query 25724 CCCGGCACCTGGGAGGACGGCGTCGTCGACTATCGACAGATTGCTCACAACCTCACG--- 25780
|||||||||||| ||||| |||| ||||| || ||||| || | | ||| |
Sbjct 524 AAAGGCACCTGGGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGC 583
Query 25781 ---CAGTACACGTACGCGTACGACGACGTTGCCAAGGCGGCGTACATTTATCGCGCAT-C 25836
||| |||| | ||||||| | || | ||| | ||| | | || | | |
Sbjct 584 GGCGAGTGGCAGTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGT-TCAAACCTAC 642
Query 25837 CGACGGCAACTTGATTAGCTACGACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGT 25896
| |||| | |||| | || ||||| || ||||| ||||| | ||| || ||
Sbjct 643 CACCGGCGATCTGATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGT 702
Query 25897 ATTGGACCACGAGCTGGCCGGTCTGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCT 25956
||||| | |||||| ||| || || ||||||| || ||||| |||||||| || |
Sbjct 703 GTTGGATAAGCAGCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGATAT 762
Query 25957 GCTCAACGCCATGAAC 25972
|||||| |||||||
Sbjct 763 TCTCAACAGCATGAAC 778
>seq2274
Length=37031
Score = 127 bits (140), Expect = 2e-24
Identities = 154/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || ||||| || | ||| ||| | ||||| ||
Sbjct 30364 AAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCA-TCCTCCAG 30306
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | || || |||||||| || ||||| || || |||||||| |||
Sbjct 30305 CTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGAT 30246
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | ||||| || || | |||||||| || | ||||| ||| |||||
Sbjct 30245 CTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCTTGCC 30186
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||||||||||||
Sbjct 30185 AGTCAAGGTCTTGACGAAAATCTGCAT 30159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483130342655080
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