Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2144 230 2e-55 seq42801 196 5e-45 seq2274 127 2e-24 >seq2144 Length=13752 Score = 230 bits (254), Expect = 2e-55 Identities = 765/1168 (65%), Gaps = 59/1168 (5%) Strand=Plus/Minus Query 148046 ATTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCG 148105 |||||| || || || || |||||||| || ||||| || || ||||||| || || | Sbjct 4797 ATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATT-GTGG 4739 Query 148106 -CTTTATCTTCATCTCCCAGGCCGTCTTGTACAGC---CGCTTGATATGATCGGGAATGC 148161 ||||| || ||||| | ||||| || || ||| | ||| |||||| Sbjct 4738 ACTTTACGGATATTTCCCAAACGGTCTTATATAGTTCACGCACATTTTGA---GGAATGT 4682 Query 148162 CGTCGATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGT 148221 |||||| || | ||||| || || | || ||||| ||| || || Sbjct 4681 TTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGATTTTTCATATCATCATCCC 4622 Query 148222 ATAGGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGG 148281 | | || || ||| | || ||| | || || |||||||| ||||||||||| || | Sbjct 4621 ACAAGTCCAGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAG 4562 Query 148282 CGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCA 148341 ||||| || | || | ||| || | ||||| || || || || || |||| Sbjct 4561 ACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCA 4502 Query 148342 AAATCTGCGCGGTCGTTGCCGTGGGCAT--GTACGCTACCAGCAGCGAGTTGCGCAAACC 148399 ||||| || |||| |||||| ||||| || || || ||||| || || |||| || Sbjct 4501 TTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATA--AGCAGAGAATTACGCACTCC 4444 Query 148400 GCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTT 148459 | | || |||| || ||| || ||||||||||||||| | ||| | || Sbjct 4443 GTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATT 4384 Query 148460 CCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGG 148519 |||||| || ||||| ||||| || |||| | || || ||||| || | |||| Sbjct 4383 CCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATAGGTCTCATACGT 4324 Query 148520 TCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGC 148579 || | | | ||||| || ||||| || || | ||||| |||||||| || ||| Sbjct 4323 GCCATCTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCG-- 4266 Query 148580 AATTTGCCTGTTG----AGCAGCGCCGCCGACTCGCTTTCGTACGGCATA-CGCAGCCGC 148634 ||| | |||||| || || |||| || || || || || ||| |||| Sbjct 4265 AATAT--CTGTTGATTCAGAAGACACGCCTTATCACTCTCATA-GGGATACCGCATTAAA 4209 Query 148635 ACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGA- 148693 | || || || ||||| || || || || | ||||| || || ||| | | |||||| Sbjct 4208 ATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGAT 4149 Query 148694 ----GAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTG 148748 || | || || || || |||| ||| |||||||||||| ||||| || Sbjct 4148 TTCTTAGCCTCGGGC-----AGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTT 4094 Query 148749 CGCACCACCACCTTTGT-AATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGAT 148807 | || | ||| || | ||| | ||| |||| |||||| ||| ||| || | Sbjct 4093 TG-GTAACAATCTTGGTGACCTCTTTG-AGCTTCACAAAGTCGTAC--GTCTTCTCCGGT 4038 Query 148808 GCATCG-----GTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCG 148862 | || || | || || || || | |||||| || || ||||||| || || Sbjct 4037 GTTACGAACATATTGAGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTGGTGCA 3978 Query 148863 CTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGA 148922 ||||| || || || | ||||| || |||||||| || |||||| || | ||| Sbjct 3977 GAATACTCAACAATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGG 3918 Query 148923 TTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGC 148982 |||||||||| ||| |||| |||||| | |||||||||||| |||||| ||||| || Sbjct 3917 TTGCTCTTGCGGTTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGT 3858 Query 148983 GTTTCCACTATG---AACCGATGCAGGTCCTGCGCGCGCACTTGCT-GCTCG--TAG--C 149034 | || | ||| |||| | ||| || || |||| | | || | | | Sbjct 3857 GACTCAATGATGGCAAACCAA---AGGGATTGAGC-----CTTGATAACACGATTTGCTC 3806 Query 149035 GACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGA 149094 ||||||||| ||||||| ||||| ||| ||| ||| || || | ||| ||| Sbjct 3805 GACCCTCCTTCTCGTATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGA 3746 Query 149095 GACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCA 149154 | || || ||||||||||||||||| || ||||| | | | || | ||||||||||| Sbjct 3745 GTCCTGGACACTTGTGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCA 3686 Query 149155 TAAACAGATCGGGCACCCAGAGCGCGTA 149182 |||||| ||| || | ||| || || || Sbjct 3685 TAAACAAATCTGGTATCCACAGGGCATA 3658 >seq42801 Length=1186 Score = 196 bits (216), Expect = 5e-45 Identities = 529/796 (66%), Gaps = 39/796 (5%) Strand=Plus/Plus Query 25198 CGACTCGGTGCAAGAGTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTG 25257 || ||||||| |||||| ||| |||||||||||||| |||||||| || |||| || Sbjct 1 CGGCTCGGTGAAAGAGTTCCTGCAGACCTGGAAGTTCTTCGACGGCGTGGATATCGACTG 60 Query 25258 GGAGTTTCCCGGCGGCAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGC 25317 ||| || || |||||||| |||||||||||| | |||||| | | || || | | Sbjct 61 GGAATTCCCGGGCGGCAAAGGCGCCAACCCGAATCTGGGCAGCCCTCAGGACG---GGGA 117 Query 25318 CACCTACACTACCCTGTTGGCGGAGCTGCGCGCGATGCTCGACGCGCT--CGGTGCCCAC 25375 || || ||| || || ||||| |||||||| || ||| ||| | || Sbjct 118 AACTTATGTGCTGCTGATGAAAGAACTGCGGGCGATGCTGGATCAGCTGTCGGCGGAAAC 177 Query 25376 CAAAACCGCCACTACCTGCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTC 25435 | |||| | || ||| || ||| || ||||| ||||| |||||||||| | Sbjct 178 CGG--CCGCAAGTATGAGCTGACCTCCGCCATCAGCGCCGGCAAGGACAAGATCGACAAG 235 Query 25436 GTCGACTACACTGAGGCGCAAAAGTATCTCGAT----CTGATATTCCTCATGTCGTACGA 25491 || | |||| | ||||| | ||||||| | || ||||| ||| ||||| Sbjct 236 GTGGCATACAACGTCGCGCAGA----TCTCGATGGTTCACATCTTCCTGATGAGCTACGA 291 Query 25492 TTTTAAGGGCGGCTGGTCGCTC--AACGAGCTCGGTCATCAGACGGCGCTTTACGCGCCC 25549 || | |||| || ||| || || | || || |||||||| ||||| | ||||| Sbjct 292 CTTCTACGGCGCCT--TCGATCTGAAAAACCTGGGGCATCAGACCGCGCTGAATGCGCCG 349 Query 25550 CCGTGGCGGCCCGACGAACCG--TACTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGC 25607 | || || ||| |||| ||| | ||| || || | |||||||| |||| Sbjct 350 GCCGGGAAACCGGAC--ACCGCCTACACCACGGTGAACGGCGTGAATGCGCTGCTGGCGC 407 Query 25608 AACACGTGCCCAAGAA---CAAGATTGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGA 25664 | ||| |||| |||||| || | ||| |||||||| |||||||| |||| Sbjct 408 AGGGCGT---CAAGCCGGGCAAGATCGTCGTCGGCACCGCCATGTATGGCCGCGGTTGGA 464 Query 25665 CGGGCGT-AGCGAGCGACGACAGCGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTC 25723 | || || | || || || | | | ||| ||| ||| |||||||||||||| || ||| Sbjct 465 CCGGGGTGAACG-GCTACCAGAACAACATTCCGTTCACCGGCACCGCCACCGGGCCGGTC 523 Query 25724 CCCGGCACCTGGGAGGACGGCGTCGTCGACTATCGACAGATTGCTCACAACCTCACG--- 25780 |||||||||||| ||||| |||| ||||| || ||||| || | | ||| | Sbjct 524 AAAGGCACCTGGGAGAACGGCATCGTGGACTACCGCCAGATCGCCAGCCAGTTCATGAGC 583 Query 25781 ---CAGTACACGTACGCGTACGACGACGTTGCCAAGGCGGCGTACATTTATCGCGCAT-C 25836 ||| |||| | ||||||| | || | ||| | ||| | | || | | | Sbjct 584 GGCGAGTGGCAGTACACCTACGACGCCACGGCGGAAGCGCCTTACGTGT-TCAAACCTAC 642 Query 25837 CGACGGCAACTTGATTAGCTACGACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGT 25896 | |||| | |||| | || ||||| || ||||| ||||| | ||| || || Sbjct 643 CACCGGCGATCTGATCACCTTTGACGATGCCCGCTCGGGGCAGGCCAAAGGCAAGTACGT 702 Query 25897 ATTGGACCACGAGCTGGCCGGTCTGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCT 25956 ||||| | |||||| ||| || || ||||||| || ||||| |||||||| || | Sbjct 703 GTTGGATAAGCAGCTGGGCGGCCTATTCTCCTGGGAGATCGACGCGGACAACGGCGATAT 762 Query 25957 GCTCAACGCCATGAAC 25972 |||||| ||||||| Sbjct 763 TCTCAACAGCATGAAC 778 >seq2274 Length=37031 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| || | ||| ||| | ||||| || Sbjct 30364 AAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCA-TCCTCCAG 30306 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || |||||||| || ||||| || || |||||||| ||| Sbjct 30305 CTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATACCCTCCTTGTCCTGGAT 30246 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | ||||| || || | |||||||| || | ||||| ||| ||||| Sbjct 30245 CTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCCACCTCCAAGGTGATGGTCTTGCC 30186 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || |||||||||||||| Sbjct 30185 AGTCAAGGTCTTGACGAAAATCTGCAT 30159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483130342655080