Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2144 129 1e-24 >seq2144 Length=13752 Score = 129 bits (142), Expect = 1e-24 Identities = 333/501 (66%), Gaps = 21/501 (4%) Strand=Plus/Plus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || ||| | || | ||| | ||||| ||| | ||||| || ||| | ||| ||| Sbjct 3466 AATGGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTTAT 3525 Query 110727 GTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 ||| |||| ||||| || ||| ||| | ||||| || || ||||| ||||||||| Sbjct 3526 GTGGATCAGGGTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGGCAT 3585 Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843 || ||| | ||||| ||||| || ||| || || || || ||||| | || Sbjct 3586 TCCGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGAACATCGTGCT 3645 Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903 || ||| | || ||||| ||||||| ||||||| || ||||| || || ||| ||| Sbjct 3646 CGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGCCAAT 3705 Query 110904 G-GCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAA 110962 | | || ||||| || ||||| || || | ||| || || ||||||| | || | Sbjct 3706 GAGGAT-TGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGGTGA 3764 Query 110963 AGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT--- 111019 ||||||| || || || |||||| | |||||| || ||| | ||||| Sbjct 3765 TAAGTTTGAGGAGCTCTATACAAAATACG----AGAAGG--AGGGTCG--AGCAAATCGT 3816 Query 111020 ----TCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 || | |||||| |||||||| ||| |||| |||||||| || ||||| || Sbjct 3817 GTTATCAAGGCTCAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACA 3876 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || || || | | || ||| ||| ||||| || ||| ||| | || ||| Sbjct 3877 CCGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACA 3936 Query 111135 ATTAAGTCTAGTAATTTGTGC 111155 ||||| | ||||| |||||| Sbjct 3937 ATTAAATGCAGTAACTTGTGC 3957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186081891323387