Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 129 1e-24
>seq2144
Length=13752
Score = 129 bits (142), Expect = 1e-24
Identities = 333/501 (66%), Gaps = 21/501 (4%)
Strand=Plus/Plus
Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726
|| ||| | || | ||| | ||||| ||| | ||||| || ||| | ||| |||
Sbjct 3466 AATGGTACATCCAATGGCTTGGTTCCTATGCTGAGAGTATTTAACAATGTGGCACGTTAT 3525
Query 110727 GTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783
||| |||| ||||| || ||| ||| | ||||| || || ||||| |||||||||
Sbjct 3526 GTGGATCAGGGTGGCGGCAAAAGACCTGGAGCTTTTGCCATTTACCTCGAGCCTTGGCAT 3585
Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843
|| ||| | ||||| ||||| || ||| || || || || ||||| | ||
Sbjct 3586 TCCGATGTCTTTGAGTTCTTGGATCTTAAGAAGAACACTGGCAAAGAGGAACATCGTGCT 3645
Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903
|| ||| | || ||||| ||||||| ||||||| || ||||| || || ||| |||
Sbjct 3646 CGGGATCTGTTCTATGCCCTGTGGATACCAGATTTGTTTATGAAGCGCGTGGAAGCCAAT 3705
Query 110904 G-GCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAA 110962
| | || ||||| || ||||| || || | ||| || || ||||||| | || |
Sbjct 3706 GAGGAT-TGGTCACTGATGTGCCCGCACAAGTGTCCAGGACTCGCTGATGTTTGGGGTGA 3764
Query 110963 AGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT--- 111019
||||||| || || || |||||| | |||||| || ||| | |||||
Sbjct 3765 TAAGTTTGAGGAGCTCTATACAAAATACG----AGAAGG--AGGGTCG--AGCAAATCGT 3816
Query 111020 ----TCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
|| | |||||| |||||||| ||| |||| |||||||| || ||||| ||
Sbjct 3817 GTTATCAAGGCTCAATCCCTTTGGTTTGCCATCATTGAGTCACAAGTGGAGACTGGCACA 3876
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|| || || | | || ||| ||| ||||| || ||| ||| | || |||
Sbjct 3877 CCGTACATGCTCTTCAAGGATTCGTGTAACCGCAAGAGCAACCAACAAAATGTGGGCACA 3936
Query 111135 ATTAAGTCTAGTAATTTGTGC 111155
||||| | ||||| ||||||
Sbjct 3937 ATTAAATGCAGTAACTTGTGC 3957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186081891323387
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |