Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2144 167 2e-36 seq7704 98.7 9e-16 >seq2144 Length=13752 Score = 167 bits (184), Expect = 2e-36 Identities = 825/1289 (64%), Gaps = 51/1289 (4%) Strand=Plus/Minus Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631 || || || || ||||| | ||||||||| || ||||| || || | ||| ||| Sbjct 4904 GCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTAAGACCCGCTTTCCAGGAGAAG 4845 Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691 ||||| || |||| | | || | || || || || || |||||| ||||| Sbjct 4844 AAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCTACATGAATATTAAAGGATTGA 4785 Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTCATT 146751 |||||||| |||||||| || || || ||||| | || || ||| ||| Sbjct 4784 CTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATTGTGGACTTTACGGATATT 4725 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCT-ATCT---GGAATACCTTCAATGTTTTG 146807 |||||| |||| || || || || |||| || | ||||| ||| |||||||| Sbjct 4724 TCCCAAACGGTCTTATATAG----TTCACGCACATTTTGAGGAATGTTTTCGATGTTTTG 4669 Query 146808 AATAGAGCC----CTTGTGCGCAAAAATAGTGTTTCGTATT-TCGGGCGTGTAAAGGTTT 146862 || ||||| |||| || | | | |||| ||| || | | | || Sbjct 4668 TATGGAGCCACGACTTG--CGATTATTTGATTTTTCATATCATCATCCC---ACAAGTCC 4614 Query 146863 AGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACA 146922 |||| | || ||| | |||| ||||| || || |||||||| || | |||||| Sbjct 4613 AGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAGACAGCACT 4554 Query 146923 CGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGG 146982 ||||| || | || |||| | || || ||||| |||||||| || | ||| ||| Sbjct 4553 CGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGG 4494 Query 146983 GCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG 147042 || || | ||| || ||||| || | | || ||||| |||| |||| | | Sbjct 4493 GCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTT 4434 Query 147043 ATGTTGTCCTTCAAAGTTTG--CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGT 147100 || || ||||| | |||| ||||||||| | | ||| | |||||||| | Sbjct 4433 ATCTTCTCCTTGA--GTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATTCCACATAT 4376 Query 147101 CGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGC 147160 | |||||||| | || || | ||||| || | | || || | || || Sbjct 4375 CATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATAGGTCTCATACGTGCCATCTT 4316 Query 147161 GCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTT 147220 || |||| |||||||| || || | || |||||||| ||||||||| || |||| Sbjct 4315 TCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTT 4256 Query 147221 TGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATAC-GCAGAAGCACAAAGGCATCG 147279 || || | ||| | || ||||| || || |||| ||| | | || ||||| Sbjct 4255 GATTCAGAAGACACGCCTTATCACTCTCATAGGG-ATACCGCATTAAAATCAAAGCATCT 4197 Query 147280 GCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC 147339 || | || || | || | || || || ||||| || |||| ||| || ||| Sbjct 4196 GCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTTCTTAGC-CTC 4138 Query 147340 GCTATG-GGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGT 147398 | | || |||| ||| ||| || |||||||| | ||| |||| || || Sbjct 4137 GGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGT 4078 Query 147399 TATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGAC---ACGTACGCATTGGTT 147455 | |||||| ||| | || || || ||| ||| || ||| || |||| Sbjct 4077 GACCTCTTTGAGCTTCACAAAGTCGTACGTCT--TCTCCGGTGTTACGAACATATTG--- 4023 Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACG 147513 | || || || |||| |||||| || || |||| || | || || | |||| || Sbjct 4022 -AGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTG-GT-GCAGAATACTCAACA 3966 Query 147514 ATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGA 147573 ||||| | ||||| ||| |||||||| || |||| |||||| || ||||| || || Sbjct 3965 ATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGG 3906 Query 147574 TTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT- 147632 || |||| || |||||||||||||||||| ||| ||||| ||||| | |||| ||| Sbjct 3905 TTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATG 3846 Query 147633 --AAACCTATGCAGGTCCTGCG-CTCG--CACCCGCTGCCGATAGCGGCCCTCGTTTTCG 147687 ||||| | ||| || | || | || || | | | || ||||| || ||| Sbjct 3845 GCAAACCAA---AGGGATTGAGCCTTGATAACACGAT-TTGCT--CGACCCTCCTTCTCG 3792 Query 147688 TACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGA 147747 || || | | |||||||| || || | ||| || || || ||||||| Sbjct 3791 TATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTG 3732 Query 147748 TGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGC 147807 ||||| |||||||| ||||| || | || | ||||| |||||||| ||| || Sbjct 3731 TGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGT 3672 Query 147808 ACCCACAGCGCGTACATAAGATCGCGCGC 147836 | |||||| || || | ||||| || || Sbjct 3671 ATCCACAGGGCATAGAACAGATCCCGAGC 3643 >seq7704 Length=29863 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | ||||| || | |||||||||| ||||||||||| ||| | || Sbjct 18571 ACGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGT 18512 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | || || || | | |||| | |||||| ||||||||||| || || Sbjct 18511 GCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCC 18452 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || ||| || ||| | | ||| | ||||| | ||| || || || | Sbjct 18451 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAG 18392 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || ||||| || || ||||| | ||| |||||||| Sbjct 18391 AGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476324834118120