Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 167 2e-36
seq7704 98.7 9e-16
>seq2144
Length=13752
Score = 167 bits (184), Expect = 2e-36
Identities = 825/1289 (64%), Gaps = 51/1289 (4%)
Strand=Plus/Minus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || || ||||| | ||||||||| || ||||| || || | ||| |||
Sbjct 4904 GCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTAAGACCCGCTTTCCAGGAGAAG 4845
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
||||| || |||| | | || | || || || || || |||||| |||||
Sbjct 4844 AAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCTACATGAATATTAAAGGATTGA 4785
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTCATT 146751
|||||||| |||||||| || || || ||||| | || || ||| |||
Sbjct 4784 CTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTGATTGTGGACTTTACGGATATT 4725
Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCT-ATCT---GGAATACCTTCAATGTTTTG 146807
|||||| |||| || || || || |||| || | ||||| ||| ||||||||
Sbjct 4724 TCCCAAACGGTCTTATATAG----TTCACGCACATTTTGAGGAATGTTTTCGATGTTTTG 4669
Query 146808 AATAGAGCC----CTTGTGCGCAAAAATAGTGTTTCGTATT-TCGGGCGTGTAAAGGTTT 146862
|| ||||| |||| || | | | |||| ||| || | | | ||
Sbjct 4668 TATGGAGCCACGACTTG--CGATTATTTGATTTTTCATATCATCATCCC---ACAAGTCC 4614
Query 146863 AGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACA 146922
|||| | || ||| | |||| ||||| || || |||||||| || | ||||||
Sbjct 4613 AGTTCGGTTAGATCACGCAACAAATGATGATTCACAACCTGAAACTCTCCAGACAGCACT 4554
Query 146923 CGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGG 146982
||||| || | || |||| | || || ||||| |||||||| || | ||| |||
Sbjct 4553 CGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGATTCATTATTACCCATTATCTGG 4494
Query 146983 GCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG 147042
|| || | ||| || ||||| || | | || ||||| |||| |||| | |
Sbjct 4493 GCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGAATTACGCACTCCGTGCTTGCTT 4434
Query 147043 ATGTTGTCCTTCAAAGTTTG--CCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGT 147100
|| || ||||| | |||| ||||||||| | | ||| | |||||||| |
Sbjct 4433 ATCTTCTCCTTGA--GTTTCGCCCAGTCCCAGAGATTTGTGGGTACCTTATTCCACATAT 4376
Query 147101 CGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGC 147160
| |||||||| | || || | ||||| || | | || || | || ||
Sbjct 4375 CATACTGGAGAATACCCTTGCTAACTGGACTTCCCTCATAGGTCTCATACGTGCCATCTT 4316
Query 147161 GCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTT 147220
|| |||| |||||||| || || | || |||||||| ||||||||| || ||||
Sbjct 4315 TCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCCATAGTAAATGGTTTCGAATATCTGTT 4256
Query 147221 TGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATAC-GCAGAAGCACAAAGGCATCG 147279
|| || | ||| | || ||||| || || |||| ||| | | || |||||
Sbjct 4255 GATTCAGAAGACACGCCTTATCACTCTCATAGGG-ATACCGCATTAAAATCAAAGCATCT 4197
Query 147280 GCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC 147339
|| | || || | || | || || || ||||| || |||| ||| || |||
Sbjct 4196 GCAAGTCCTTGAACTCCAATTCCAATTGGACGATGTCTTAAGTTGGATTTCTTAGC-CTC 4138
Query 147340 GCTATG-GGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGT 147398
| | || |||| ||| ||| || |||||||| | ||| |||| || ||
Sbjct 4137 GGGCAGAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTTTGGTAACAATCTTGGT 4078
Query 147399 TATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGAC---ACGTACGCATTGGTT 147455
| |||||| ||| | || || || ||| ||| || ||| || ||||
Sbjct 4077 GACCTCTTTGAGCTTCACAAAGTCGTACGTCT--TCTCCGGTGTTACGAACATATTG--- 4023
Query 147456 CACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACG 147513
| || || || |||| |||||| || || |||| || | || || | |||| ||
Sbjct 4022 -AGAGCTATCGATGCCAAATTGCAAACAGCAATCTCATCTG-GT-GCAGAATACTCAACA 3966
Query 147514 ATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGA 147573
||||| | ||||| ||| |||||||| || |||| |||||| || ||||| || ||
Sbjct 3965 ATTTCAGTGCACAAGTTACTGCATTTAATTGTGCCCACATTTTGTTGGTTGCTCTTGCGG 3906
Query 147574 TTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT- 147632
|| |||| || |||||||||||||||||| ||| ||||| ||||| | |||| |||
Sbjct 3905 TTACACGAATCCTTGAAGAGCATGTACGGTGTGCCAGTCTCCACTTGTGACTCAATGATG 3846
Query 147633 --AAACCTATGCAGGTCCTGCG-CTCG--CACCCGCTGCCGATAGCGGCCCTCGTTTTCG 147687
||||| | ||| || | || | || || | | | || ||||| || |||
Sbjct 3845 GCAAACCAA---AGGGATTGAGCCTTGATAACACGAT-TTGCT--CGACCCTCCTTCTCG 3792
Query 147688 TACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGA 147747
|| || | | |||||||| || || | ||| || || || |||||||
Sbjct 3791 TATTTTGTATAGAGCTCCTCAAACTTATCACCCCAAACATCAGCGAGTCCTGGACACTTG 3732
Query 147748 TGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGC 147807
||||| |||||||| ||||| || | || | ||||| |||||||| ||| ||
Sbjct 3731 TGCGGGCACATCAGTGACCAATCCTCATTGGCTTCCACGCGCTTCATAAACAAATCTGGT 3672
Query 147808 ACCCACAGCGCGTACATAAGATCGCGCGC 147836
| |||||| || || | ||||| || ||
Sbjct 3671 ATCCACAGGGCATAGAACAGATCCCGAGC 3643
>seq7704
Length=29863
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | ||||| || | |||||||||| ||||||||||| ||| | ||
Sbjct 18571 ACGAAGGCGGAGCACCAAGTGCAATGTTGACTCTTTCTGAATGTTGTAATCGGAGAGAGT 18512
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| | || || || | | |||| | |||||| ||||||||||| || ||
Sbjct 18511 GCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGATCTGGAGGAATTCC 18452
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||| || ||| | | ||| | ||||| | ||| || || || |
Sbjct 18451 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAG 18392
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || ||||| || || ||||| | ||| ||||||||
Sbjct 18391 AGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATCTGCAT 18350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476324834118120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |