Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq14068 105 6e-18 >seq14068 Length=5400 Score = 105 bits (116), Expect = 6e-18 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTT 5392 ||| || ||||| |||| || || | ||| ||||| ||| |||| | || || | Sbjct 3169 AGATGCGTTCGCAAATGAATTGTGCGATGCGATCGCCGCGCTTCACCTCAAAA-TCGGT- 3226 Query 5393 GGCCGAA--GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCC 5450 | ||||| ||| || ||||| ||||||||||| || ||| ||||| |||||| ||||| Sbjct 3227 GTCCGAATGGTTAAACAGCACGACTCCCAGGTTGCCGCGGTAGTCCTCGTCCACAACGCC 3286 Query 5451 CGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510 || |||||||| | |||||| ||||| || || || || | || ||||| || ||||| Sbjct 3287 GGCACCCACATCAATGAAGTTCTTTACGGCCAGCCCAGAACGTGGGGCCACTCGGCCGTA 3346 Query 5511 GCAGCCGTATGGCGGGTGGATCTGCAGATCGGTC 5544 | | || | || |||| |||| ||| ||| Sbjct 3347 GGAACCCTCCGGTACTTGGACTTGCAAATCCGTC 3380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447542138238120