Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04]
48,067 sequences; 123,674,749 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2144 118 9e-22
>seq2144
Length=13752
Score = 118 bits (130), Expect = 9e-22
Identities = 516/802 (64%), Gaps = 31/802 (4%)
Strand=Plus/Minus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| || || || || | ||| || || || ||||| | ||||| ||||| || || ||
Sbjct 4925 ACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTA 4866
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
| |||| | |||||| | ||| || |||| || | ||| | || || ||
Sbjct 4865 AGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCT 4806
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
|| || ||| | ||||| || ||||| ||| ||| ||| || ||||| ||||| ||
Sbjct 4805 ACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTG 4746
Query 136819 AATA-GTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877
| | | ||||| | || |||||||| |||| ||| | || || ||||| | ||
Sbjct 4745 ATTGTGGACTTTACGGATA-TTTCCCAAACGGTCTTATATAGTTCACGCACATTTTGAGG 4687
Query 136878 AATTTCATCGATATTCTGTACAGATCCG----TTG----TTTTTGATGATTTTCATCATG 136929
||| | ||||| || |||| || || ||| | |||||| ||||||| ||
Sbjct 4686 AATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGAT--TTTTCAT-ATC 4630
Query 136930 AG-ATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTAC 136988
| ||| | ||| | ||| | | || | | | | ||| ||||| || ||
Sbjct 4629 ATCATCCCACAAGTCCA-GTT-----CGGTTAGATCACGCAACAAATGATGATTCACAAC 4576
Query 136989 TTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGA 137048
||| | || || || ||||||| | | ||| | || |||| | || ||||| ||
Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516
Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108
||| || ||||||| ||||| || |||| || || ||||| ||||| | || ||
Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456
Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTT 137168
||| || | ||||| | | | | |||||| | ||||| ||| ||||| |
Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396
Query 137169 CGATTGGGTTA--TATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCT 137226
|||| ||||||||| |||| |||| | || || || | |||||| |
Sbjct 4395 -----GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341
Query 137227 GCATAAGAATCATATGTTCCGTGCAGTTTC-GCCAGTTCAATACTCTGGACTAGTGCGCC 137285
|||| | ||||| || || | | | || ||||| ||| || | | ||||||
Sbjct 4340 TCATAGGTCTCATACGTGCCAT-CTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCC 4282
Query 137286 ATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGG 137345
||||||||| |||||| | || | | ||||| | || | | || || |||||
Sbjct 4281 ATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG 4222
Query 137346 CATATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGT 137404
||| | || || | |||||||||||||||||||||| || || || || || | |
Sbjct 4221 -ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGAT 4163
Query 137405 GTTTAAAATTTGATATTTGAGC 137426
|| | || || ||| | | |||
Sbjct 4162 GTCTTAAGTTGGATTTCTTAGC 4141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444826970593440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |