Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zaprionus_20indianus_20[genbank_20GCA_5F001752445.1_202016-10-04] 48,067 sequences; 123,674,749 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2144 118 9e-22 >seq2144 Length=13752 Score = 118 bits (130), Expect = 9e-22 Identities = 516/802 (64%), Gaps = 31/802 (4%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || || || || || | ||| || || || ||||| | ||||| ||||| || || || Sbjct 4925 ACAGTAAACTGAATAGCATTGGCTGCCGGCTTAGTGCGAAGATAATACATTCCTGTTTTA 4866 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | |||| | |||||| | ||| || |||| || | ||| | || || || Sbjct 4865 AGACCCGCTTTCCAGGAGAAGAAATGAATGGATGTCAGCTTACCATAATTTGGTTCAGCT 4806 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 || || ||| | ||||| || ||||| ||| ||| ||| || ||||| ||||| || Sbjct 4805 ACATGAATATTAAAGGATTGACTTTGATCAATGAAAGCTCCACGATCTGCTGCCATTTTG 4746 Query 136819 AATA-GTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877 | | | ||||| | || |||||||| |||| ||| | || || ||||| | || Sbjct 4745 ATTGTGGACTTTACGGATA-TTTCCCAAACGGTCTTATATAGTTCACGCACATTTTGAGG 4687 Query 136878 AATTTCATCGATATTCTGTACAGATCCG----TTG----TTTTTGATGATTTTCATCATG 136929 ||| | ||||| || |||| || || ||| | |||||| ||||||| || Sbjct 4686 AATGTTTTCGATGTTTTGTATGGAGCCACGACTTGCGATTATTTGAT--TTTTCAT-ATC 4630 Query 136930 AG-ATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTAC 136988 | ||| | ||| | ||| | | || | | | | ||| ||||| || || Sbjct 4629 ATCATCCCACAAGTCCA-GTT-----CGGTTAGATCACGCAACAAATGATGATTCACAAC 4576 Query 136989 TTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGA 137048 ||| | || || || ||||||| | | ||| | || |||| | || ||||| || Sbjct 4575 CTGAAACTCTCCAGACAGCACTCGTCTTGTGTAGATGTTTGAAGTGTAGGGTTCGAAAGA 4516 Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108 ||| || ||||||| ||||| || |||| || || ||||| ||||| | || || Sbjct 4515 TTCATTATTACCCATTATCTGGGCTGTCGATGCCGTTGGCATTGGTGCGATAAGCAGAGA 4456 Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTT 137168 ||| || | ||||| | | | | |||||| | ||||| ||| ||||| | Sbjct 4455 ATTACGCACTCCGTGCTTGCTTATCTTCTCCTTGAGTTTCGCCCAGTCCCAGAGATTTGT 4396 Query 137169 CGATTGGGTTA--TATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCT 137226 |||| ||||||||| |||| |||| | || || || | |||||| | Sbjct 4395 -----GGGTACCTTATTCCACATATCATACTGGAGAATACCCTTGCTAACTGGACTTCCC 4341 Query 137227 GCATAAGAATCATATGTTCCGTGCAGTTTC-GCCAGTTCAATACTCTGGACTAGTGCGCC 137285 |||| | ||||| || || | | | || ||||| ||| || | | |||||| Sbjct 4340 TCATAGGTCTCATACGTGCCAT-CTTTCTCAGCCAGCTCACAGCTGGCTTCCAATGCGCC 4282 Query 137286 ATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGG 137345 ||||||||| |||||| | || | | ||||| | || | | || || ||||| Sbjct 4281 ATAGTAAATGGTTTCGAATATCTGTTGATTCAGAAGACACGCCTTATCACTCTCATAGGG 4222 Query 137346 CATATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGT 137404 ||| | || || | |||||||||||||||||||||| || || || || || | | Sbjct 4221 -ATACCGCATTAAAATCAAAGCATCTGCAAGTCCTTGAACTCCAATTCCAATTGGACGAT 4163 Query 137405 GTTTAAAATTTGATATTTGAGC 137426 || | || || ||| | | ||| Sbjct 4162 GTCTTAAGTTGGATTTCTTAGC 4141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444826970593440